Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq116056 181 1e-40 seq3604 181 1e-40 >seq116056 Length=8111 Score = 181 bits (200), Expect = 1e-40 Identities = 1118/1762 (63%), Gaps = 66/1762 (4%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| || ||||| | ||| | || ||||||| || ||||| ||| | || ||| | Sbjct 1213 CCCGCAACACATGCTAATGAGAGTCTCCATCGGCATCCATGGCGAAAATATCGATCGCGC 1272 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | || || ||| | ||||| | | || ||||| || || |||| || || | Sbjct 1273 TATTGAAACCTACAATCTTATGTCTGAGAAGTG-GTTCACCCATGCGTCACCCACTCTAT 1331 Query 104340 TCAATGCTGGTACACCAA--GACCCCAAATGTCCAGTTGCTTCCTTATCGCCAA--CAAG 104395 |||| ||||| |||||| |||| ||| | ||||||||||| |||| | | | |||| Sbjct 1332 TCAACGCTGG--CACCAATAGACCTCAATTATCCAGTTGCTTT-TTATTGGCGATGCAAG 1388 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 | ||| ||| | || ||||| | ||| | | | |||| || | ||||| || Sbjct 1389 -ATGACAGCATCGATGGCATCTACGAAACCTTAAAGCAGTGCGCTCTTATCTCCAAAACT 1447 Query 104456 GCTGGGGGTATTGGGATGCACAT--CCATGATGTGAG--AGC--CAATAAATCTCGTATT 104509 ||||| || ||||| || ||| ||| || ||| ||| || | | | ||| | Sbjct 1448 GCTGGCGGGATTGGATTGAGCATTTCCAACATTAGAGCTAGCGGCAGTTA-TATCGCA-- 1504 Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569 || || || || | || | ||| | | || ||||| || || | ||| |||| Sbjct 1505 ---GGCACCAACGGAAACTCCAACGGTCTCTTGCCCATGCTGCGTGTTTATAATAACACA 1561 Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG---GGATCTATCGCAGTCTATCTTGAG 104626 || || || ||| | |||| || | || | || | |||| || || || ||| Sbjct 1562 GCACGTTACGTAGACCAAGGCGGTAATAAAAGGCCAGGTGCATTCGCGGTGTACCTCGAG 1621 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA--ACCAAGGTGACGAGG 104684 || ||||| |||||| || | || || || || ||| | || || | || | Sbjct 1622 CCGTGGCATGCGGATGTCTTTGACTT--TTTAGACGCGAAAAAGAACACGGGCAAAGATG 1679 Query 104685 AGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744 | | || || || || |||| ||| | ||||| || ||| | || ||||| | | Sbjct 1680 AATCAAGGGCACGGGACCTTTTCTACGCGATGTGGATACCGGATTTGTTTATGAAACGGG 1739 Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATG 104804 |||| | ||| ||||||| || ||||| || | | || ||| | ||| | Sbjct 1740 TTGAAAGCAATGGGGATTGGTCGCTATTTTGCCCCAATGAAGCGATAGGTTTGGTCGACG 1799 Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864 ||||| |||||||| || ||| ||||| || ||| ||| | |||| Sbjct 1800 TATATGGTGATGAGTTTGATAAGCTCTACGAGAAGTATGAAAAAGCAGGGAGAGCGAGGA 1859 Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 ||| | ||| | | ||| | || || || |||| || | ||| || |||| Sbjct 1860 AGACAATCAAAGCGCAAAAACTATGGTACGCCATCATCGAGTCGCAGATCGAAACCGGTA 1919 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 | || |||||||| ||||||||||| || ||| |||| |||||||| || |||| Sbjct 1920 CGCCGTACATGCTCTACAAAGACGCTTGCAACAAAAAATCAAATCAAAAAGATCTGGGCA 1979 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 |||||| || || |||||||| || || || | |||| || ||| || ||| || Sbjct 1980 CGATCAAAAGCTCAAATCTCTGCACTGAGATTGTAGAATACACCAGCAAGGACGAGGTGG 2039 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCA--GAGACAAAGAC 105102 | |||||||| ||||| || ||||| | ||| || || | ||| || |||| Sbjct 2040 CCGTGTGTAATCTCGCTTCGATCGCATTGCCCCGATACGT--AACCAACGATGGAAAG-- 2095 Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162 | ||||| ||||| | |||| || || ||||| || || |||| | | Sbjct 2096 -TATGATTTCAAAAAATTGTACGACGTGTGCAAGGTCGTCACACGGAATCTGAACAAAAT 2154 Query 105163 TATTGATAGAAATTTTTACCCCGTTGAGACT---GCTCGTAAATCTAATATGAGACACCG 105219 ||||| | || | |||||||| | || || | || || || ||||| ||||| Sbjct 2155 CATTGACATCAACTACTACCCCGT---GCCTCAAGCGAGGAATTCGAACATGAGGCACCG 2211 Query 105220 TCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATT 105279 ||| || ||| | || || || || || ||||| | || || | | || |||| Sbjct 2212 TCCGATCGGTATTGGAGTGCAAGGACTGGCGGACGCCTTTATCATGTTGCGAATGCCATT 2271 Query 105280 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGC 105339 || | ||| || | | | |||| | ||||| |||||||| ||| ||| || Sbjct 2272 CGACAGCCCCGAGGCCATGAAGCTCAACGTTGAAATATTCGAGACCATTTATTTCGCGGC 2331 Query 105340 TCTTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 | |||| ||| || || | || || | ||||| ||||| | || |||||| | Sbjct 2332 T-TTGACAGCGTCTTGCGAACTTGCGGAAGAGAGCGGTCCGTATGAGAGCTATGAGGGAT 2390 Query 105399 CTCC-AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TC 105455 |||| | | | ||||| | || | |||| |||||| |||| || | || | Sbjct 2391 CTCCTATCAGC-CAAGGTCAATTACAGTATGATTTGTGGG-GCGTGACCCCCA-CTGATT 2447 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | || |||| || | || || ||||| || | || | || || ||| | Sbjct 2448 TGTGGGATTGGGCGTCTTTGAAAGAGAAGATCAAAAAGCACGGAGTACGCAATTCTCTGC 2507 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | | || || ||||||||||| ||||| || ||||| |||||||||||||| | ||| Sbjct 2508 TGTTAGCGCCGATGCCAACAGCATCCACTGCTCAAATACTGGGTAATAATGAAGCCATTG 2567 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 | || ||||| | ||||| || | || | || | || || || |||||| | Sbjct 2568 AGCCATACACTAGCAACATTTACACGCGACGTGTGCTGTCCGGCGAATTCCAGATTGTAA 2627 Query 105636 ACAAGCAT---CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA-- 105690 | ||| | ||| ||||| | | ||| | ||| ||||| | | ||| | || Sbjct 2628 ATCAGCGTTTACTCATGGAT---TTGACAGAAAGAGGTATCTGGAACGATGATGTAAAGT 2684 Query 105691 -GGATCTCAT-GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAA 105748 | | ||||| | | | | | ||||| |||||||| || | ||||| | || Sbjct 2685 TGCAGCTCATCGCTAACAAC----GGTTCGATTCAAAACATCCCTCAGATTCCTGAGGAT 2740 Query 105749 ATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCC 105808 || ||||| ||||| || || || ||||| || | |||| | |||| | ||||| Sbjct 2741 ATGAAGAAATTGTATCGTACCGTGTGGGAGATTTCGCAGAAGAACATCATCAAAATGGCT 2800 Query 105809 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCAT-GGAAAGTCC 105867 || || || | | | ||| || |||||||||||| |||| | ||| | || | Sbjct 2801 GCCGACCGGGCACCGTACATCGACCAAAGTCAAAGTTTGAACATTCACATCGCCGAGCCT 2860 Query 105868 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 105927 ||| | | |||| | | ||||| | ||| | |||||| || ||||| ||||| Sbjct 2861 AACTACG-GCAAGTTGACCAGCATGCATTTTTACGGGTGGAAGGTCGGACTCAAGACGGG 2919 Query 105928 GATGTATTACCTCCGATCTAAG 105949 ||||||||| || ||| | ||| Sbjct 2920 GATGTATTATCTTCGAACGAAG 2941 >seq3604 Length=7407 Score = 181 bits (200), Expect = 1e-40 Identities = 1132/1787 (63%), Gaps = 66/1787 (4%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| || ||||| | ||| | || ||||||| || ||||| ||| | || ||| | Sbjct 3647 CCCGCAACACATGCTAATGAGAGTCTCCATCGGCATCCATGGCGAAAATATCGATCGCGC 3706 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | || || ||| | ||||| | | || ||||| || || |||| || || | Sbjct 3707 TATTGAAACCTACAATCTTATGTCTGAGAAGTG-GTTCACCCATGCGTCACCCACTCTAT 3765 Query 104340 TCAATGCTGGTACACCAA--GACCCCAAATGTCCAGTTGCTTCCTTATCGCCAA--CAAG 104395 |||| ||||| |||||| |||| ||| | ||||||||||| |||| | | | |||| Sbjct 3766 TCAACGCTGG--CACCAATAGACCTCAATTATCCAGTTGCTTT-TTATTGGCGATGCAAG 3822 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 | ||| ||| | || ||||| | ||| | | | |||| || | ||||| || Sbjct 3823 -ATGACAGCATCGATGGCATCTACGAAACCTTAAAGCAGTGCGCTCTTATCTCCAAAACT 3881 Query 104456 GCTGGGGGTATTGGGATGCACAT--CCATGATGTGAG--AGC--CAATAAATCTCGTATT 104509 ||||| || ||||| || ||| ||| || ||| ||| || | | | ||| | Sbjct 3882 GCTGGCGGGATTGGATTGAGCATTTCCAACATTAGAGCTAGCGGCAGTTA-TATCGCA-- 3938 Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569 || || || || | || | ||| | | || ||||| || || | ||| ||| Sbjct 3939 ---GGCACTAACGGAAACTCGAACGGTCTCTTGCCTATGCTGCGTGTTTACAACAACACG 3995 Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG---GGATCTATCGCAGTCTATCTTGAG 104626 || || || ||| | |||| || | || | || | | || || || || || Sbjct 3996 GCACGTTACGTAGACCAAGGCGGTAATAAAAGGCCAGGTGCATTTGCGGTGTACCTCGAA 4055 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA--ACCAAGGTGACGAGG 104684 || ||||| |||||| || | || || || || ||| | || || | || | Sbjct 4056 CCGTGGCATGCGGATGTCTTTGACTT--TTTAGACGCGAAAAAGAACACCGGCAAAGATG 4113 Query 104685 AGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744 || | | || || || |||| ||| | ||||| || ||| | || ||||| | | Sbjct 4114 AGTCAAGAGCTCGGGACCTTTTCTACGCGATGTGGATACCGGATTTGTTTATGAAACGGG 4173 Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATG 104804 |||| | ||| ||||||| || ||||| || | | || |||| | ||| | Sbjct 4174 TTGAAAGCAATGGAGATTGGTCGCTATTTTGCCCCAATGAAGCGATTGGTTTGGTCGACG 4233 Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864 ||||| || ||||| |||||| ||||| || ||| ||| | |||| Sbjct 4234 TTTATGGTGATGAATTTGATAAGCTTTACGAGAAGTATGAAAAAGCAGGGAGAGCGAGGA 4293 Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 ||| | ||| | ||||| | || || || |||| || | ||| || |||| Sbjct 4294 AGACAATCAAAGCGCAAAAACTGTGGTACGCCATCATCGAGTCGCAGATCGAAACCGGTA 4353 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 | || |||||||| ||||||||||| || ||| |||| ||||| || ||| |||| Sbjct 4354 CGCCGTACATGCTCTACAAAGACGCTTGCAACAAAAAATCAAATCAGAAAAATCTGGGCA 4413 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 |||||| || || |||||||| || || || | |||| || ||| || ||| || Sbjct 4414 CGATCAAAAGCTCGAATCTCTGCACTGAGATTGTAGAATACACCAGCAAGGACGAGGTGG 4473 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGAC--AAAGAC 105102 | || ||||| ||||| || ||||| | ||| ||||| | ||| ||| |||| Sbjct 4474 CCGTATGTAATCTCGCTTCGATCGCATTGCCCCGTTATGT--AACCAACGACGGAAAG-- 4529 Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162 | ||||| ||||| | |||| || || ||||| || || |||| | | Sbjct 4530 -TATGATTTCAAAAAATTGTACGACGTGTGCAAGGTAGTCACACGGAATCTGAACAAAAT 4588 Query 105163 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222 ||||| | || | ||||| || || | || || || ||||| |||||||| Sbjct 4589 CATTGACATCAACTACTACCCTGTACCTCAAGCGAGGAATTCGAACATGAGGCACCGTCC 4648 Query 105223 AATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 105282 ||| ||| | || || || || |||||||| | || || | | || | ||||| Sbjct 4649 AATCGGTATTGGAGTGCAAGGGCTCGCGGACGCCTTTATCATGTTGCGAATGCCGTTTGA 4708 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 | ||| || | | | |||| | ||||| |||||||| ||| ||| ||| | Sbjct 4709 CAGCCCCGAGGCCATGAAGCTCAACGTTGAAATATTCGAGACCATTTATTTCGCGGCT-T 4767 Query 105343 TGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 105401 ||| ||| || || | || || | ||||| ||||| | || |||||| |||| Sbjct 4768 TGACAGCGTCTTGCGAACTTGCGGAAGAGAGCGGTCCGTATGAGAGCTATGAGGGATCTC 4827 Query 105402 CAGCTTCA--CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCAC 105457 | | ||| ||||| | || | |||| |||||| |||| || | || | Sbjct 4828 CTG--TCAGCCAAGGTCAATTACAGTATGATTTGTGGG-GCGTGACCCCCA-CTGATTTG 4883 Query 105458 TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 | || |||| || | || || ||||| || | || | ||||| ||| || Sbjct 4884 TGGGATTGGGCGTCTTTGAAAGAGAAGATCAAAAAGCACGGAGTACGTAATTCTCTGCTG 4943 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577 | || || ||||||||||| ||||| || ||||| |||||||||||||| | |||| Sbjct 4944 TTAGCGCCGATGCCAACAGCATCCACTGCTCAAATACTGGGTAATAATGAAGCCATTGAG 5003 Query 105578 CCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637 || ||||| | ||||| || | | | || | || || || |||||| || Sbjct 5004 CCATACACCAGCAACATTTACACGCGTCGTGTGCTGTCCGGCGAATTCCAGATTGTAAAT 5063 Query 105638 AAGCAT---CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA---G 105691 ||||| ||| ||||| | | ||| | ||| ||||| | | || | || | Sbjct 5064 CAGCATCTACTCATGGAT---TTGACAGAAAGAGGTATCTGGAACGATGACGTAAAGTTG 5120 Query 105692 GATCTCATGGTGAA-AGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAAT 105750 | || || | || | | || || ||||| || || | ||||| | || || Sbjct 5121 CAGCTTATCGCAAACAAC----GGATCGATTCAGAACATCCCTCAGATTCCTGAGGATAT 5176 Query 105751 TAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGC 105810 ||| | ||||| || || || ||||| || | |||| | |||| | ||||| || Sbjct 5177 GAAGGAATTGTATCGTACCGTGTGGGAGATTTCGCAGAAGAACATCATCAAAATGGCAGC 5236 Query 105811 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAA---TCTCTTCATGGAAAGTCC 105867 || || | | | ||| || |||||||||||| |||| || | || || || | Sbjct 5237 CGACCGGGCACCGTACATCGACCAAAGTCAAAGTTTGAACATTCACATCGCGG--AGCCT 5294 Query 105868 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 105927 ||| | | |||||| || ||||| | ||| | |||||| || ||||| || || Sbjct 5295 AACTACG-GCAAGCTGACTAGCATGCATTTTTACGGGTGGAAGGTCGGACTCAAGACCGG 5353 Query 105928 GATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974 ||||||||| || ||| | ||| || || | | |||||||||| Sbjct 5354 GATGTATTATCTTCGAACGAAGCCAGCAGCTCAAGCCATTCAGTTCA 5400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582384895384360