Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1613 158 1e-33 seq114234 152 4e-32 seq114236 141 8e-29 seq80631 116 3e-21 seq74517 116 3e-21 >seq1613 Length=19885 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| ||||| || | || ||||| || || || | || Sbjct 155 ATGCAAATCTTTGTCAAGACTCTTACCGGTAAAACCATCACTCTGGAGGTTGAGGCTTCT 214 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| || ||||| ||||| || || ||||||||| Sbjct 215 GACACCATCGATAATGTCAAGCAGAAAATCCAGGACAAGGAAGGTATCCCTCCCGATCAA 274 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| ||||||||||| | ||| | ||| |||||| Sbjct 275 CAGCGTCTCATCTTCGCTGGCAAGCAATTGGAAGATGGCCGCACCCTCAGCGACTACAAC 334 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| ||||| || || ||||| ||||| ||| ||||||| || Sbjct 335 ATCCAAAAGGAATCGACTTTGCACTTGGTCTTGCGATTGAGGGGTGGAAT 384 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||| || | |||||||||||||| || | ||| Sbjct 383 ATGCAGATTTTCGTGAAGACTCTGACCGGAAAAACCATTACTCTTGAAGTCGAGGCTTCC 442 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || |||||||| || |||||||| || || || ||||| Sbjct 443 GACACCATCGATAATGTCAAGCAGAAAATTCAGGATAAAGAAGGGATTCCTCCTGATCAG 502 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| || || |||||||| || | ||| | || ||||| Sbjct 503 CAACGTCTTATCTTCGCTGGTAAGCAATTGGAGGATGGCCGTACCCTCAGTGACTACAAT 562 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || || || ||||| || | || | |||||||| Sbjct 563 ATCCAAAAAGAATCTACTTTGCACTTGGTCCTGAGACTGAGAGGTGGCAT 612 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || |||||||| || || || ||| | || || ||||| || ||| | || Sbjct 610 CATGCAAATCTTCGTAAAAACCCTCACAGGAAAGACGATCACGCTTGAGGTCGAAGCCTC 669 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || || |||||||| |||||||| || || ||||| Sbjct 670 GGACACCATCGATAACGTCAAGCAGAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCA 729 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| |||| | ||||||||| || ||||||| | || || ||| ||||| Sbjct 730 GCAGCGTCTAATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGTACGCTTAGCGACTACAA 789 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||||||||| || || || Sbjct 790 CATTCAAAAAGAATCTAC 807 >seq114234 Length=910 Score = 152 bits (168), Expect = 4e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| ||||| | |||||| | || || || | || Sbjct 72 ATGCAAATCTTCGTCAAAACTTTGACAGGCAAAACCATTACTTTGGAGGTCGAGGCTTCT 131 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| ||||||||||| || ||||||||| Sbjct 132 GACACCATTGATAATGTCAAGCAGAAGATTCAAGATAAAGAAGGCATTCCTCCCGATCAA 191 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| |||||||||||| | || | ||| |||||| Sbjct 192 CAGCGTCTCATCTTCGCCGGCAAGCAATTGGAAGACGGCCGCACTCTCAGCGACTACAAC 251 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || ||||| ||||| || || || ||||| Sbjct 252 ATCCAAAAAGAGTCTACTTTGCACTTGGT 280 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| ||||| | |||||| | || || || | || Sbjct 528 ATGCAAATCTTCGTGAAAACTTTGACAGGCAAAACCATTACTTTGGAGGTCGAGGCTTCT 587 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| ||||||||||| || ||||||||| Sbjct 588 GACACCATTGATAATGTCAAGCAGAAGATTCAAGATAAAGAAGGCATTCCTCCCGATCAA 647 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||||| ||||||||||| | || | ||| |||||| Sbjct 648 CAGCGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGCCGCACTCTCAGCGACTACAAC 707 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || ||||| ||||| || || || ||||| Sbjct 708 ATCCAAAAAGAGTCTACTTTGCACTTGGT 736 Score = 127 bits (140), Expect = 2e-24 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| ||||||| || ||||||| || ||||| || | || Sbjct 300 ATGCAAATCTTCGTCAANACTTTGACCGGTAAAACTATTACCCTCGAAGTCGAGGCTTCA 359 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || |||| || |||||||||||||| || |||||||| Sbjct 360 GACACTATCGATAATGTGAAGCAGAAAANCCAGGACAAAGAAGGCATTCCTCCCGATCAG 419 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| |||||||| ||| | || | ||| |||||| Sbjct 420 CAGCGTCTCATCTTNGCNGGCAAGCAATTGGANGACGGCCGNACNCTCAGCGACTACAAC 479 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || || || ||||| || | || | ||||| || Sbjct 480 ATCCANAANGANTCNACTTTGCACTTGGTCCTGAGACTGAGAGGTGGAAT 529 >seq114236 Length=889 Score = 141 bits (156), Expect = 8e-29 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| ||||| ||||||| || ||||| || | || Sbjct 590 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACTATTACCCTCGAAGTCGAGGCTTCA 531 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| || ||||| |||||||| || |||||||| Sbjct 530 GACACTATCGATAATGTGAAGCAGAAAATCCAGGACAAGGAAGGCATTCCTCCCGATCAG 471 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||||| |||||||||||| | || | ||| |||||| Sbjct 470 CAGCGTCTCATCTTTGCCGGCAAGCAATTGGAAGACGGCCGCACTCTNAGCGACTACAAC 411 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| ||||| || || || |||||| || | ||| | || || || Sbjct 410 ATCCAAAAAGAGTCTACTTTGCACTTGGTTCTGAGATTGAGAGGAGGTAT 361 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| ||||||| || |||| ||| | || || || | || Sbjct 818 ATGCAAATCTTTGTCAAGACTTTGACCGGTAAAACTATCACTTTGGAGGTCGAGGCTTCT 759 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || |||||||| ||||||||||| || || |||||| Sbjct 758 GACACCATCGAAAATGTAAAATCGAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 699 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||| || || ||||||||| | ||| | ||| |||||| Sbjct 698 CAACGTCTTATCTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACCCTAAGCGACTACAAC 639 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || ||||| ||||| || || ||||| Sbjct 638 ATCCAGAAGGAATCGACTTTGCACTTGGT 610 Score = 123 bits (136), Expect = 2e-23 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| ||||||| || |||| ||| | || || || | || Sbjct 362 ATGCAAATCTTNGTCAAGACTTTGACCGGTAAAACTATCACTNTGGAGGTCGAGGCTTCT 303 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || |||||||| ||||||||||| || || |||||| Sbjct 302 GACACCATCGAAAATGTAAAATCGAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 243 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||| || || ||||||||| | ||| | ||| |||||| Sbjct 242 CAACGTCTTATCTTCGCCGGTAAGCAGTTGGAAGACGGCCGCACCCTNAGCGACTACAAC 183 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || ||||| ||||| || || ||||| Sbjct 182 ATCCAGAAGGAATCGACTTTGCACTTGGT 154 >seq80631 Length=8887 Score = 116 bits (128), Expect = 3e-21 Identities = 202/294 (69%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 135461 ACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCAC 135520 || || |||| | |||||||||| || || |||| | || ||||||||||| Sbjct 3783 ACCCACGACCGGCTGTGGAACGCCGCCCAGTTGCAGATGGTGCACACCGGCAAAATGCAT 3724 Query 135521 GGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAG 135580 || || ||| | ||||| ||||| || || ||| | || ||||||| ||| || | | || Sbjct 3723 GGTTTCATGAGGATGTACTGGGCGAAGAAAATACTCGAGTGGTCTGAATCACCGGAAAAG 3664 Query 135581 GCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAAT 135640 || || | ||||| | || ||| | || | || || || ||| |||| Sbjct 3663 GCTCTCGAGATTGCAATCAAGCTGAACGATAAGTATGAACTTGACGGCCGTGATCCAAAC 3604 Query 135641 GGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGC 135700 || || || || || |||||||| || || || | || |||||||| |||| ||| | Sbjct 3603 GGGTATGTTGGATGCATGTGGTCGATCTGTGGCATTCATGATCAAGGGTGGAGAGAGAGA 3544 Query 135701 AAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTT 135754 | || || || |||||||||| ||||| || | |||||| |||||||||| Sbjct 3543 GAGGTTTTCGGTAAGATTCGCTTCATGAATTACAAGGGTTGTCAAAGAAAATTT 3490 >seq74517 Length=5657 Score = 116 bits (128), Expect = 3e-21 Identities = 202/294 (69%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 135461 ACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCAC 135520 || || |||| | |||||||||| || || |||| | || ||||||||||| Sbjct 4460 ACCCACGACCGGCTGTGGAACGCCGCCCAGTTGCAGATGGTGCACACCGGCAAAATGCAT 4401 Query 135521 GGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAG 135580 || || ||| | ||||| ||||| || || ||| | || ||||||| ||| || | | || Sbjct 4400 GGTTTCATGAGGATGTACTGGGCGAAGAAAATACTCGAGTGGTCTGAATCACCGGAAAAG 4341 Query 135581 GCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAAT 135640 || || | ||||| | || ||| | || | || || || ||| |||| Sbjct 4340 GCTCTCGAGATTGCAATCAAGCTGAACGATAAGTATGAACTTGACGGCCGTGATCCAAAC 4281 Query 135641 GGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGC 135700 || || || || || |||||||| || || || | || |||||||| |||| ||| | Sbjct 4280 GGGTATGTTGGATGCATGTGGTCGATCTGTGGCATTCATGATCAAGGGTGGAGAGAGAGA 4221 Query 135701 AAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTT 135754 | || || || |||||||||| ||||| || | |||||| |||||||||| Sbjct 4220 GAGGTTTTCGGTAAGATTCGCTTCATGAATTACAAGGGTTGTCAAAGAAAATTT 4167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434265266729280