Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq29052 89.7 1e-12 >seq29052 Length=3906 Score = 89.7 bits (98), Expect = 1e-12 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 294857 AATA-TGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCT 294915 |||| ||||||| || | ||| ||||||| | |||||||||||||||| ||||||||| Sbjct 3015 AATAGTGGTGCCCCCACACGGACTCGAACC-GCGGACCTACTGATTACAAATCAGTTGCT 3073 Query 294916 CTACCAGCTGAGCTATAACGGCA 294938 ||||||||||||||||| |||| Sbjct 3074 CTACCAGCTGAGCTATAGGGGCA 3096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987811536417267