Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1613 170 5e-37 seq114234 152 1e-31 seq114236 145 2e-29 seq3604 89.7 1e-12 seq2597 89.7 1e-12 seq116056 84.2 5e-11 >seq1613 Length=19885 Score = 170 bits (188), Expect = 5e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| || ||||| ||||||||||| | ||||| ||| | || | |||||| Sbjct 822 AGTACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGCTAAGCGTACGGCCATCT 763 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || || || || ||||| |||||||||||| Sbjct 762 TCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 703 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||| || ||||||||||| |||| ||| || || | |||||||||| Sbjct 702 TGGATCTTCTGCTTGACGTTATCGATGGTGTCCGAGGCTTCGACCTCAAGCGTGATCGTC 643 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||||||| ||| | |||||| Sbjct 642 TTTCCTGTGAGGGTTTTTACGAAGATTTGCAT 611 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||||||| | ||| | ||| ||||||||||||| |||||| || | || | Sbjct 600 AGTCTCAGGACCAAGTGCAAAGTAGATTCTTTTTGGATATTGTAGTCACTGAGGGTACGG 541 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || | ||||| |||||||||||||| ||||| || || || ||||| ||||| Sbjct 540 CCATCCTCCAATTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATCCCTTCT 481 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || || || || || ||||| ||| ||||||||||| || | || || || | || Sbjct 480 TTATCCTGAATTTTCTGCTTGACATTATCGATGGTGTCGGAAGCCTCGACTTCAAGAGTA 421 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || || |||| ||| || | ||| | |||||| Sbjct 420 ATGGTTTTTCCGGTCAGAGTCTTCACGAAAATCTGCATT 382 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 || || ||| | ||| | ||| ||||| ||||||| ||||| ||| | || | || Sbjct 370 TCGCAAGACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGGCC 311 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct 310 ATCTTCCAATTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATACCTTCCTT 251 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| ||||| || ||||| ||| ||||||||||| || | || || || | ||||| Sbjct 250 GTCCTGGATTTTCTGCTTGACATTATCGATGGTGTCAGAAGCCTCAACCTCCAGAGTGAT 191 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || | ||| || | || | |||||| Sbjct 190 GGTTTTACCGGTAAGAGTCTTGACAAAGATTTGCAT 155 Score = 100 bits (110), Expect = 7e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | ||||||||| || |||| ||||| ||| | || | ||||| Sbjct 138 AGAACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCC 79 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | ||||| ||||||||||| || || || || ||||| ||||| ||||||||||| Sbjct 78 TCCAATTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCC 19 Query 225622 TGGATCTTTTGCTTCACA 225639 ||||| || ||||||||| Sbjct 18 TGGATTTTCTGCTTCACA 1 >seq114234 Length=910 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| ||||| | ||| | ||| || |||||||||| ||||| ||| | ||| | Sbjct 745 AGTCTGAGGACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGG 686 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| | ||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct 685 CCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGTTGATCGGGAGGAATGCCTTCT 626 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||| ||||| ||||| ||| || |||||||| || | || || || || || Sbjct 625 TTATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTA 566 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || ||||| ||||||||||| | ||| | ||||||| Sbjct 565 ATGGTTTTGCCTGTCAAAGTTTTCACGAAGATTTGCATT 527 Score = 145 bits (160), Expect = 2e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| | ||| || |||||||||| ||||| ||| | ||| | || Sbjct 287 TCTNAGNACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTGCGGCC 228 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| || |||||||| || || ||||| ||||| ||||| ||||| || Sbjct 227 GTCTTCCAATTGCTTGCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCTTCTTT 168 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| ||||| ||||| ||| || |||||||| || | || || || || || || Sbjct 167 ATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAAGTAAT 108 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| ||||||||||| | ||| | ||||||| Sbjct 107 GGTTTTGCCTGTCAAAGTTTTGACGAAGATTTGCATT 71 Score = 131 bits (144), Expect = 4e-25 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||||||| | ||| | ||| || || || |||| ||||| ||| | || | Sbjct 517 AGTCTCAGGACCAAGTGCAAAGTNGANTCNTTNTGGATGTTGTAGTCGCTGAGNGTNCGG 458 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || | ||||| || || ||||| || || || || ||||| ||||| ||||| Sbjct 457 CCGTCNTCCAATTGCTTGCCNGCNAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCT 398 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| ||| | || ||||||||| ||||| |||||||| | || || || | || Sbjct 397 TTGTCCTGGNTTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTA 338 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || || |||||||| || | ||| | ||||||| Sbjct 337 ATAGTTTTACCGGTCAAAGTNTTGACGAAGATTTGCATT 299 Score = 113 bits (124), Expect = 1e-19 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| ||||||||||| || || || || ||||| ||||| || |||||||| ||||| Sbjct 901 TGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATT 842 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||||||||| ||||| |||||||| | || || || | || || || || || Sbjct 841 TTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCG 782 Query 225688 GTCAAAGTTTTTATGAACACTTGCATT 225714 |||||||| || | ||| | ||||||| Sbjct 781 GTCAAAGTCTTGACGAAGATTTGCATT 755 >seq114236 Length=889 Score = 145 bits (160), Expect = 2e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 |||||| || | ||| | ||| || |||||||||| ||||| ||| | ||| | || Sbjct 375 TCTCAGAACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTNAGAGTGCGGCC 434 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| || || ||||| || || || || ||||| ||||| |||||||| Sbjct 435 GTCTTCCAATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTT 494 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| ||||| || ||||||||| ||||| |||||||| | || || || | || || Sbjct 495 GTCCTGGATTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAAT 554 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| |||||||| || | ||| | ||||||| Sbjct 555 AGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCATT 591 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| ||||| | ||| | ||| ||||| || |||| ||||| ||| | || | Sbjct 601 AGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGG 660 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || ||||| | |||||| || ||||||||||| |||||||| || || ||||| ||||| Sbjct 661 CCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCT 720 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||| ||||| || ||| |||||||||||| || | || || || || ||| Sbjct 721 TTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCAAAGTG 780 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || |||||||| || | || | |||||| Sbjct 781 ATAGTTTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 818 Score = 134 bits (148), Expect = 3e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| ||||| | ||| | ||| ||||| || |||| ||||| ||| | || | Sbjct 145 AGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTNAGGGTGCGG 204 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || ||||| | |||||| || ||||||||||| |||||||| || || ||||| ||||| Sbjct 205 CCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCTTCT 264 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||| ||||| || ||| |||||||||||| || | || || || | ||| Sbjct 265 TTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCANAGTG 324 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || |||||||| || | || | |||||| Sbjct 325 ATAGTTTTACCGGTCAAAGTCTTGACNAAGATTTGCAT 362 Score = 100 bits (110), Expect = 7e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 225580 AAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACA 225639 ||||| || || || || ||||| ||||| ||||||||||| ||||| || ||||||||| Sbjct 1 AAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACA 60 Query 225640 GCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTT 225699 ||||| |||||||| | || || || | || || || || || |||||||| || Sbjct 61 TTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTCTTG 120 Query 225700 ATGAACACTTGCATT 225714 | ||| | ||||||| Sbjct 121 ACGAAGATTTGCATT 135 >seq3604 Length=7407 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 193583 CCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTTCCTTCCCTCTCGTACTTTTCGTA 193642 ||| |||| ||| ||||| | |||| | || || | ||| | | || ||||| ||||| Sbjct 4319 CCACAGTTTTTGCGCTTTGATTGTCTTCCTCGCTCTCCCTGCTTTTTCATACTTCTCGTA 4260 Query 193643 CAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGACCGGGAGCTTCCTTTGGGCAAAA 193702 || | ||||| || | || || | ||| | | ||| ||||| || |||||||| Sbjct 4259 AAGCTTATCAAATTCATCACCATAAACGTCGACCAAACCAATCGCTTCATTGGGGCAAAA 4200 Query 193703 GAGACTCCAATCTCCATCACTTTCCACCCTCTTCATGAAGAGGTCAGATGTCCAAATGGC 193762 || ||||||||||| ||||| |||| ||||| || | || | | |||| || || Sbjct 4199 TAGCGACCAATCTCCATTGCTTTCAACCCGTTTCATAAACAAATCCGGTATCCACATCGC 4140 Query 193763 GTAGAAAAG 193771 ||||||||| Sbjct 4139 GTAGAAAAG 4131 >seq2597 Length=9084 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 || || ||||| |||||||| || || ||||| | ||||| || ||| ||||| ||| Sbjct 3339 CTAAGTACAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCACTCAAGGTTCTGCCA 3398 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 ||||| | ||||| ||||||||||| || || || || ||||| ||||| ||| Sbjct 3399 TCTTCCAATTGCTTTCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATTCCT 3452 >seq116056 Length=8111 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 193583 CCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTTCCTTCCCTCTCGTACTTTTCGTA 193642 ||| |||| ||| ||||| | |||| | || || | ||| | | || ||||| ||||| Sbjct 1885 CCATAGTTTTTGCGCTTTGATTGTCTTCCTCGCTCTCCCTGCTTTTTCATACTTCTCGTA 1826 Query 193643 CAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGACCGGGAGCTTCCTTTGGGCAAAA 193702 || | ||||| || | || || | ||| | | ||| ||||| || |||||||| Sbjct 1825 GAGCTTATCAAACTCATCACCATATACGTCGACCAAACCTATCGCTTCATTGGGGCAAAA 1766 Query 193703 GAGACTCCAATCTCCATCACTTTCCACCCTCTTCATGAAGAGGTCAGATGTCCAAATGGC 193762 || |||||| |||| ||||| |||| ||||| || | || | | |||| || || Sbjct 1765 TAGCGACCAATCCCCATTGCTTTCAACCCGTTTCATAAACAAATCCGGTATCCACATCGC 1706 Query 193763 GTAGAAAAG 193771 ||||||||| Sbjct 1705 GTAGAAAAG 1697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1190695559456466