Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq8437 150 1e-31 >seq8437 Length=12918 Score = 150 bits (166), Expect = 1e-31 Identities = 422/648 (65%), Gaps = 16/648 (2%) Strand=Plus/Plus Query 29592 TCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTC-AGC 29650 |||| |||| |||| ||| || || ||||| ||||| | || || || || || | Sbjct 5639 TCCTCGTTATGCTCAATGTCGGGAACGGTCTTGGCTCACGCTTCAGTTGT-TCTTCGATT 5697 Query 29651 GGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGT 29710 | ||| ||||| | ||| || |||||||| || | || || || || || || ||| Sbjct 5698 GCTTCAACGTGATTCGTGTAAACATGAGCATCACCAATAGTATGTACGAAGTCACCGGGT 5757 Query 29711 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 29770 | | || || ||||| ||||| |||||||| | || ||||||||||| || || Sbjct 5758 TTCAAATTCGTAACATGAGCAATCATATACGTGAGTAAGGAATAGCTGGCGATATTGAAC 5817 Query 29771 GGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCG 29830 || | || | |||||||| | || | || || ||||| || || |||||||| || Sbjct 5818 GGGATGCCTAAGCCCATGTCTGCAGATCGTTGATAAAGCTGACAAGACAGCTCTCCATCA 5877 Query 29831 CTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTG 29890 || ||||| || || | ||||| ||||| || | ||||| || | || ||| Sbjct 5878 GAAACATAAAATTGGCATAGAGCATGACACGGGGGTAATGCCATTTGAGGGATATCCTTG 5937 Query 29891 GGGTTCCAGGCACACACGATGATGCGCCTG-TCTTC----TGGGTTGT-TCCTGATGAGG 29944 | ||||| || |||| || || |||||| | ||| ||| |||| || || ||| Sbjct 5938 GCATTCCATGCGCACATTATAATCCGCCTGCTATTCGGATTGGATTGTATCGTGTTGATA 5997 Query 29945 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNN 30004 | |||| ||||| || || || | || | ||| || | Sbjct 5998 ACATCGGC------AAGCTGGTCAACACCTTTTCCAGTGTAATCGGCATGCATGTCTTGG 6051 Query 30005 NNNNNNNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30064 | ||||| | ||| || || || || ||||| || ||||| |||||||| Sbjct 6052 TATTCAGCTCCAAAATGGCGCCATTGAAATCCATAAACCGGACCAAGGTCGCCCTCTTCG 6111 Query 30065 CTGTGCTCGAAGCCC-CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30123 | | || || ||| ||| || ||| ||| | || ||||| || ||||| || | Sbjct 6112 C-GATCTGAAAACCCAGACTTACTCAGAAATTCTTTAGAGCCGTTTGCATCCCAAATGTG 6170 Query 30124 TACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30183 ||| ||| || ||||| || || | ||| || ||| | | |||||||| ||| || Sbjct 6171 TACTTTCTTATCCGAGAGTTCCTTTGCGTTAGTACTCCCCTTTATGAACCACAACAGTTC 6230 Query 30184 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231 ||||| ||| | ||||||| || | ||| |||||||| | ||||| Sbjct 6231 CTCCAATACGCCTCTCCAAAACACGCGCTTTGTCGTGAGCAAAGGAAA 6278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405568498254154