Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq114234 143 6e-29 seq1613 141 2e-28 seq114236 136 9e-27 seq116056 89.7 1e-12 seq3604 84.2 5e-11 >seq114234 Length=910 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||||||||| | || | |||||||||||||||||||||||| ||| | ||| Sbjct 748 CTCAGTCTGAGGACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTG 689 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| | || ||||| ||||| || | ||| || || | | || ||| Sbjct 688 CGGCCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGTTGATCGGGAGGAATGCCT 629 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || |||||||| || || |||||| | || | | |||| ||| ||| || || | | Sbjct 628 TCTTTATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAA 569 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| |||||||| || | ||| |||||||||| |||||| Sbjct 568 GTAATGGTTTTGCCTGTCAAAGTTTTCACGAAGATTTGCATT 527 Score = 129 bits (142), Expect = 1e-24 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || | ||| || || | || | |||||||||||||||||||||||| ||| | ||| Sbjct 292 CTCANTCTNAGNACCAAGTGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTGAGAGTG 233 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || ||||| | || ||||||||||| || | ||| || || | | || ||| Sbjct 232 CGGCCGTCTTCCAATTGCTTGCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCT 173 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || |||||||| || || |||||| | || | | |||| ||| ||| || || | | Sbjct 172 TCTTTATCTTGAATCTTCTGCTTGACATTATCAATGGTGTCAGAAGCCTCGACCTCCAAA 113 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| |||||||| || | ||| || ||||||| |||||| Sbjct 112 GTAATGGTTTTGCCTGTCAAAGTTTTGACGAAGATTTGCATT 71 Score = 104 bits (114), Expect = 5e-17 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| ||||| | || | ||| || || || ||||||||||| ||| | || Sbjct 520 CTCAGTCTCAGGACCAAGTGCAAAGTNGANTCNTTNTGGATGTTGTAGTCGCTGAGNGTN 461 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || || || | || || || ||||| || | |||||| || | | || ||| Sbjct 460 CGGCCGTCNTCCAATTGCTTGCCNGCNAAGATGAGACGCTGCTGATCGGGAGGAATGCCT 401 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || || |||| || || ||| | || | |||||||| ||| ||||| || Sbjct 400 TCTTTGTCCTGGNTTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGG 341 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||||||| || || | ||| || ||||||| |||||| Sbjct 340 GTAATAGTTTTACCGGTCAAAGTNTTGACGAAGATTTGCATT 299 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || |||||||| || | |||||| || | | || || ||||| || || ||||| Sbjct 898 TTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATTTTC 839 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || || ||| | || | |||||||| ||| ||||| || ||||||||||| || || Sbjct 838 TGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTC 779 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 | |||||| ||||||| |||||| Sbjct 778 AAAGTCTTGACGAAGATTTGCATT 755 >seq1613 Length=19885 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| ||||| | || | |||||| ||||||||||| ||||| || | || Sbjct 603 CTCAGTCTCAGGACCAAGTGCAAAGTAGATTCTTTTTGGATATTGTAGTCACTGAGGGTA 544 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||| || | || || ||||||||||| | ||||| || | | || ||| Sbjct 543 CGGCCATCCTCCAATTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATCCCT 484 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || |||||||| || |||||| | || | | |||| ||| ||| ||||||||| Sbjct 483 TCTTTATCCTGAATTTTCTGCTTGACATTATCGATGGTGTCGGAAGCCTCGACTTCAAGA 424 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 ||||| ||||| || || |||||||||||||| | ||||||| |||| Sbjct 423 GTAATGGTTTTTCCGGTCAGAGTCTTCACGAAAATCTGCATTCCACCC 376 Score = 129 bits (142), Expect = 1e-24 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAA-GTTCTCCCATC 151951 || ||||||||||||||||| |||||||| |||||||| ||| |||| || | ||||| Sbjct 822 AGTACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAGTCG-CTAAGCGTACGGCCATC 764 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || ||||||||||| || | |||||| || | | || |||||||| || Sbjct 763 TTCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTC 704 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || ||||| | || | | |||| || || || ||||| || || || Sbjct 703 TTGGATCTTCTGCTTGACGTTATCGATGGTGTCCGAGGCTTCGACCTCAAGCGTGATCGT 644 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||||| ||||| Sbjct 643 CTTTCCTGTGAGGGTTTTTACGAAGATTTGCAT 611 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || |||||||||||||| ||| | || | |||||||| | Sbjct 361 CAAG-TGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCTTCCA 303 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| || | ||| || || | | ||| |||||||| || || | Sbjct 302 ATTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATACCTTCCTTGTCCTGGA 243 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || |||||| | || | | |||| ||| ||| || || ||||| || ||||| | Sbjct 242 TTTTCTGCTTGACATTATCGATGGTGTCAGAAGCCTCAACCTCCAGAGTGATGGTTTTAC 183 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || |||||||| || |||| ||||| Sbjct 182 CGGTAAGAGTCTTGACAAAGATTTGCAT 155 >seq114236 Length=889 Score = 136 bits (150), Expect = 9e-27 Identities = 156/209 (75%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | |||||||||||||||||||||||| ||| | ||| | || ||||| | Sbjct 384 CAAG-TGCAAAGTAGACTCTTTTTGGATGTTGTAGTCGCTNAGAGTGCGGCCGTCTTCCA 442 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||| ||||| || | |||||| || | | || |||||||| || || | Sbjct 443 ATTGCTTGCCGGCAAAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGA 502 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || ||| | || | |||||||| ||| ||||| || ||||||||||||| Sbjct 503 TTTTCTGCTTCACATTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTGC 562 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || | |||||| ||||||| |||||| Sbjct 563 CTGTCAAAGTCTTGACGAAGATTTGCATT 591 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||||||||| | || | ||| || || || ||||||||||| ||| || || Sbjct 598 CTCAGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTTAGGGTG 657 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || ||||| | || |||||||||||||| | || || || | | || ||| Sbjct 658 CGGCCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCT 717 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || |||||||| || ||| ||| | || | | |||| ||| ||| || || | | Sbjct 718 TCTTTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCAAA 777 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || || | |||||| || |||| ||||| Sbjct 778 GTGATAGTTTTACCGGTCAAAGTCTTGACAAAGATTTGCAT 818 Score = 104 bits (114), Expect = 5e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||||||||| | || | ||| || || || ||||||||||| ||| | || Sbjct 142 CTCAGTCTGAGGACCAAGTGCAAAGTCGATTCCTTCTGGATGTTGTAGTCGCTNAGGGTG 201 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || ||||| | || |||||||||||||| | || || || | | || ||| Sbjct 202 CGGCCGTCTTCCAACTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGAATGCCT 261 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || |||||||| || ||| ||| | || | | |||| ||| ||| || || | | Sbjct 262 TCTTTATCTTGAATCTTCGATTTTACATTTTCGATGGTGTCAGAAGCCTCGACCTCCANA 321 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || || | |||||| || |||| ||||| Sbjct 322 GTGATAGTTTTACCGGTCAAAGTCTTGACNAAGATTTGCAT 362 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 151971 AAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACA 152030 ||||| || | |||||| || | | || |||||||| || || ||||| || || ||| Sbjct 1 AAGATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTCACA 60 Query 152031 GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTC 152090 | || | |||||||| ||| ||||| || ||||||||||| || || | |||||| Sbjct 61 TTATCGATAGTGTCTGAAGCCTCGACTTCGAGGGTAATAGTTTTACCGGTCAAAGTCTTG 120 Query 152091 ACGAAGACCTGCATT 152105 ||||||| |||||| Sbjct 121 ACGAAGATTTGCATT 135 >seq116056 Length=8111 Score = 89.7 bits (98), Expect = 1e-12 Identities = 158/225 (70%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 115563 GATATCTTTGACTTTGTTGAGGCGAGAAA--AC-CTGGAGGAGACGACTTGATGAGGGCA 115619 ||| ||||||||||| | || |||| ||| || | || ||| || | | ||||| Sbjct 1634 GATGTCTTTGACTTTTTAGACGCGAAAAAGAACACGGGCAAAGATGAATCAA---GGGCA 1690 Query 115620 AGGGAGATTTTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTC-AAGGCAAA 115678 |||| ||||||| || || |||| | | ||| | |||||||| || || || |||| Sbjct 1691 CGGGACCTTTTCTACGCGATGTGGATACCGGATTTGTTTATGAAACGGGTTGAAAGCAAT 1750 Query 115679 CGGAATGTGGAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCC 115738 || || ||| || ||||| ||||||||||| ||| | | || || |||||| Sbjct 1751 GGGGAT-TGGTCGCTATTTTGCCCCAATGAAGCGATAGGTTTGGTCGACGTATATGGTGA 1809 Query 115739 AGAGTTTGAGAATCTTTACGAAAGGTACGAGAAAGAGGGAAGAGC 115783 |||||||| || || ||||| | ||| || |||| || ||||| Sbjct 1810 TGAGTTTGATAAGCTCTACGAGAAGTATGAAAAAGCAGGGAGAGC 1854 >seq3604 Length=7407 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/225 (70%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 115563 GATATCTTTGACTTTGTTGAGGCGAGAAA--AC-CTGGAGGAGACGACTTGATGAGGGCA 115619 ||| ||||||||||| | || |||| ||| || | || ||| || | | | || Sbjct 4068 GATGTCTTTGACTTTTTAGACGCGAAAAAGAACACCGGCAAAGATGAGTCAA---GAGCT 4124 Query 115620 AGGGAGATTTTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTC-AAGGCAAA 115678 |||| ||||||| || || |||| | | ||| | |||||||| || || || |||| Sbjct 4125 CGGGACCTTTTCTACGCGATGTGGATACCGGATTTGTTTATGAAACGGGTTGAAAGCAAT 4184 Query 115679 CGGAATGTGGAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCC 115738 | || ||| || ||||| ||||||||||| |||| | | || ||||||||| Sbjct 4185 GGAGAT-TGGTCGCTATTTTGCCCCAATGAAGCGATTGGTTTGGTCGACGTTTATGGTGA 4243 Query 115739 AGAGTTTGAGAATCTTTACGAAAGGTACGAGAAAGAGGGAAGAGC 115783 || ||||| || |||||||| | ||| || |||| || ||||| Sbjct 4244 TGAATTTGATAAGCTTTACGAGAAGTATGAAAAAGCAGGGAGAGC 4288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152044745637269