Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1531 262 4e-65 seq1648 239 5e-58 seq1456 159 4e-34 seq1001 152 5e-32 seq317 152 5e-32 seq1446 134 1e-26 seq1787 116 4e-21 seq1554 84.2 2e-11 >seq1531 Length=8964412 Score = 262 bits (290), Expect = 4e-65 Identities = 434/624 (70%), Gaps = 2/624 (0%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| || || | |||||| || || ||||| || || || ||||| ||| ||| Sbjct 402628 GAGCCCCTACTACAGGAGAACTCCAATCGCTTCGTCATCTTTCCTATACAGAACCACGAC 402687 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| ||||||||| ||||||| |||||| |||||||| ||||| || ||| | Sbjct 402688 ATCTGGTTCATGTACAAGAAGGCCGTGGCGTCATTCTGGACAACGGAGGAAGTAGACATA 402747 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 |||||| | | | ||| | | | | |||||||| || ||||||||| || Sbjct 402748 GGTAAGGACTTGGACCATTGGAGGAGTCTCACTGACAACGAAAAACACTTCATCAAGTAC 402807 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 | |||| || || || || || || || ||||||| ||||||||||| ||| | ||| Sbjct 402808 ATTTTGGCATTCTTTGCAGCTAGTGATGGTATCGTCAGTGAGAATCTGGTAGAGAGATTC 402867 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875 | |||||||| || ||||||| |||||||||| ||||| ||||| ||||| ||| Sbjct 402868 TACAAAGAGGTGCAATTGACCGAGGCCAGGTGCTTCTATGGCTTCCAGATTGCCATTGAG 402927 Query 116876 AACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAG 116935 ||| | || || |||||||| | | |||||||| ||| | | || | ||| Sbjct 402928 AACATCCATTCTGAAATGTACAGTCTCTTGATCGACACCTACATTGAGGATCCGCATGAG 402987 Query 116936 AAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGG 116995 || | | |||| || || |||||||| | || || || || ||||||| |||||| Sbjct 402988 AAAAAGCATCTGTTTAATGCAATCGAGACCACACCTTGTGTAAAGAAGAAGGCTGAGTGG 403047 Query 116996 GCGCTGCGCTGGATCGCCG-GCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGC 117054 || || | ||||| | | | | || ||| | || || || || |||| || ||||| Sbjct 403048 GCCCTCAGGTGGATTGGAGACCTGCGA-GCCACTTTTGGGGAACGTGTGGTTGCTTTCGC 403106 Query 117055 GGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACG 117114 || || || || |||| || || || || || || ||||| ||| | ||||| | Sbjct 403107 AGCTGTGGAAGGGATCTTTTTCTCTGGGTCCTTTGCAGCTATATTCTGGTTGAAGAAGAG 403166 Query 117115 CGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCA 117174 || | ||||| || ||||||||| ||||||||| ||| ||| || ||||| |||| Sbjct 403167 AGGATTGATGCCAGGGCTGACTTTCTCCAACGAGCTGATCAGCAGAGATGAGGGGATGCA 403226 Query 117175 TTGCGACTTTGCCTGTTTGCTGTT 117198 || ||||||||| || |||| Sbjct 403227 CACTGAGTTTGCCTGTCTGATGTT 403250 >seq1648 Length=77580 Score = 239 bits (264), Expect = 5e-58 Identities = 340/474 (72%), Gaps = 6/474 (1%) Strand=Plus/Minus Query 116828 CAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCG 116887 ||||| | ||||| ||||| ||||| || || |||||||||||||||||||| |||||| Sbjct 8671 CAGGTTCCGGAGGCTCGGTGTTTCTATGGGTTCCAGATCGCCATGGAGAACGTCCACTCG 8612 Query 116888 GAAATGTATTCGACC--CTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTT 116945 || ||||| | || || || ||||||||| | || ||| ||||| | || Sbjct 8611 GAGATGTA--CAGCCTGCTGATTGACACGTACATCCGGGACCCGGGGGAGAGACAGCGGC 8554 Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGT-CAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004 |||| || | ||||| | || || || | || |||||| || |||||||||| Sbjct 8553 TGTTCCGGGCAGTGGAGACCCTCCCCTGTGTGCGCAG-GAAGGCGGACTGGGCGCTGCAG 8495 Query 117005 TGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAG 117064 ||||||||| | | ||| || |||||| ||||| ||||| |||||||| ||||| ||| Sbjct 8494 TGGATCGCCAGTAAAGACACCAGCTTCGGGGAGCGGCTGGTCGCCTTCGCTGCCGTGGAG 8435 Query 117065 GGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATG 117124 || |||||||| || || || || ||||| || ||||| ||||||||||| || ||| Sbjct 8434 GGAGTCTTCTTCTCAGGGTCATTTGCTGCCATTTTCTGGCTAAAGAAACGCGGGCTGATG 8375 Query 117125 CCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTT 117184 || |||||||| ||| || || || || | |||||||| |||| || || || Sbjct 8374 CCAGGCCTGACCTTCTCAAATGAACTAATTAGTCGTGACGAGGGCTTGCACTGTGAGTTC 8315 Query 117185 GCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATC 117244 ||||| || |||| || || ||| | || | || ||| ||| | || | ||||| Sbjct 8314 GCCTGCCTGTTGTTTAAACACTTGATCCACCCGCCCAGCCCGGACAGAGTGACACAGATC 8255 Query 117245 GTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTG 117298 |||||| | || ||| ||||||||| ||||| || || || || ||||| Sbjct 8254 GTCACCCAGGCCGTCAGTATCGAGCAGGAGTTCCTTACGGAGGCCATGTCGGTG 8201 Score = 127 bits (140), Expect = 2e-24 Identities = 170/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 116604 GGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGG 116663 |||| ||| |||||||||| | ||| | ||||||||| | | ||||||||||| | | Sbjct 11144 GGTTTGTGGTTTTCCCCATCCGATATCACGACATGTGGGACTTCTACAAAAAGGCGCAAG 11085 Query 116664 CGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGG-GAGCGC 116722 | ||||||||| | || |||||||| || ||||||| | |||||| | ||| Sbjct 11084 CCTCGTTCTGGTGTGCAGAAGAGGTGGATCTTGGGAAGGACATGGCGGACTGGTGTTCGC 11025 Query 116723 TTGAACGACAACG-AGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGA 116781 | ||| | | || |||| | || | |||||| || || || ||||| |||||||| Sbjct 11024 T-GAA-GCCGGCGGAGCGGCGGTTTCTGTCGCACGTTCTCGCTTTCTTCGCTGCCAGCGA 10967 Query 116782 CGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGT 116832 ||| |||||||| ||||| ||||| || || ||| |||||||||||||| Sbjct 10966 CGGGATCGTCAATGAGAACCTGGTGGAACGCTTCTGCCAGGAGGTGCAGGT 10916 >seq1456 Length=293654 Score = 159 bits (176), Expect = 4e-34 Identities = 179/237 (76%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 40682 TCCGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCG 40741 || ||| ||||| || || || ||||| || || ||||| ||||||||| | || |||| Sbjct 118957 TCAGAATCATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTTGAGGTCG 119016 Query 40742 AAGCCA-CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCC 40800 | |||| |||||| | | | | |||||| || || | ||||| |||||||||||| Sbjct 119017 A-GCCATCCGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCC 119075 Query 40801 GCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 40860 | |||||||| || || |||| ||| ||||| |||||||| || | |||||||| Sbjct 119076 CCAGACCAGCAGCGTCTTATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCT 119135 Query 40861 GACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||||||||||| |||| || || || ||| |||| || | || ||| Sbjct 119136 GACTACAACATCCAGAAGGAGTCCACCCTCCACCTTGTGCTGCGTCTGCGTGGTGGC 119192 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748 ||||| || || || || || ||||| ||||| ||||||||| | || ||||| |||| | Sbjct 119648 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAAGTCGA-GCCATC 119706 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | |||||| || || | ||||| |||||||||||| | ||||| Sbjct 119707 CGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 119766 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| |||||||| || | |||||||| |||||||| Sbjct 119767 GCAGCGTCTTATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 119826 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| |||| || || || ||| |||| || | || ||| Sbjct 119827 CATCCAGAAGGAGTCCACCCTCCACCTTGTGCTGCGTCTGCGTGGTGGC 119875 Score = 154 bits (170), Expect = 2e-32 Identities = 176/230 (77%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748 ||||| || ||||| ||||| ||||| ||||| ||||||||| | || ||||| |||| | Sbjct 119193 ATGCAGATCTTCGTCAAAACCCTCACAGGCAAGACCATCACCCTTGAAGTCGA-GCCATC 119251 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | | |||| |||||| || || | ||||| |||||||||||| | |||| Sbjct 119252 CGACACTATCGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACC 119310 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| || ||||| |||||||| || | |||||| | |||||||| Sbjct 119311 AGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCTTGTCCGACTACA 119370 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||| ||| || || || ||| | || || | || ||| Sbjct 119371 ACATCCAGAAGGAGAGCACTCTCCA-CTTGTGCTCCGTCTGCGTGGAGGC 119419 Score = 152 bits (168), Expect = 5e-32 Identities = 167/217 (77%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || ||||| ||||||||| |||| || || |||| | Sbjct 120332 ATGCAGATCTTCGTCAAAACCCTGACAGGCAAGACCATCACCCTCGAGGTTGA-GCCATC 120390 Query 40750 -GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| |||||| || || | ||||| ||||||||||| | |||| Sbjct 120391 AGACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAGACC 120449 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || ||||||| ||| ||||||||| |||| || | |||||||| |||||||| Sbjct 120450 AACAGCGTCTCATCTTCGCCGGCAAACAGTTGGAAGATGGCCGCACCCTGTCCGACTACA 120509 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||| ||| || || | ||| |||| Sbjct 120510 ACATCCAGAAGGAGAGCACCCTCCACTTGGTGCTGCG 120546 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| ||||| |||||||| | || || || | | Sbjct 119876 ATGCAGATTTTCGTCAAAACCCTCACAGGCAAGACCATCACTCTTGAAGTTGAGCCGTCA 119935 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| |||||||||||| | ||||| Sbjct 119936 GACACCATCGAGAACG-TGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 119994 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| |||||||| || | |||||||| |||||||| Sbjct 119995 GCAGCGTCTTATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 120054 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| |||| || || || ||| |||| || | || ||| Sbjct 120055 CATCCAGAAAGAGTCCACCCTCCACCTTGTGCTGCGTCTGCGTGGAGGC 120103 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || ||||||||| |||| || || | | Sbjct 120104 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTCGAGGTGGAGCCGTCA 120163 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| |||||||||||| | ||||| Sbjct 120164 GACACCATTGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 120222 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || ||||| |||||||| || | |||||||| |||||||| Sbjct 120223 GCAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 120282 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| |||| || ||||| || |||| || | || ||| Sbjct 120283 CATCCAGAAAGAGTCCACCCTTCATCTTGTCCTGCGTCTGCGTGGTGGC 120331 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || ||||| ||||| ||||||||| | || || || | | Sbjct 119420 ATGCAGATATTTGTGAAGACCCTCACAGGCAAGACCATCACCCTAGAAGTGGAGCCGTCA 119479 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| | |||| || || | ||||| ||||||||||| | |||||| Sbjct 119480 GATACCATTGAAAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAG 119539 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 119540 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 119599 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| ||| || || Sbjct 119600 ATCCAGAAGGAGAGCACTCTCCA 119622 >seq1001 Length=3733086 Score = 152 bits (168), Expect = 5e-32 Identities = 170/222 (77%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||| ||||| || ||||| || || || || ||||| ||||||||| | || || || | Sbjct 1254176 GAAATATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGA-G 1254234 Query 40745 CCA-CCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGC 40802 ||| |||||| | | | |||| |||||| || || | ||||| |||||||||||| | Sbjct 1254235 CCATCCGACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCC 1254293 Query 40803 GGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 40862 |||||||| || || |||| || ||||| |||||||| || | |||||||| ||| Sbjct 1254294 AGACCAGCAGCGTCTTATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGA 1254353 Query 40863 CTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||||||||| ||| || || | ||| |||| Sbjct 1254354 CTACAACATCCAGAAGGAGAGCACCCTCCACTTGGTGCTGCG 1254395 >seq317 Length=4125 Score = 152 bits (168), Expect = 5e-32 Identities = 175/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| | || || || |||| | Sbjct 773 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTGGAAGTTGA-GCCATC 831 Query 40750 -GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | ||||| |||||| || || | ||||| ||||||||||| | |||| Sbjct 832 TGACACCATTGAAAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCAGACC 890 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| || ||||| ||| |||| || | |||||||| |||||||| Sbjct 891 AGCAGCGTCTCATCTTTGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCCGACTACA 950 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||| ||| | || || ||||| ||| |||| || | || ||| Sbjct 951 ACATCCAGAAAGAGTCAACCCTTCATCTGGTGCTGCGTCTGCGTGGTGGC 1000 Score = 147 bits (162), Expect = 2e-30 Identities = 166/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || ||||| ||||||||| | || || || |||| | Sbjct 1457 ATGCAGATCTTCGTTAAAACCCTGACAGGCAAGACCATCACCCTGGAAGTGGA-GCCATC 1515 Query 40750 -GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| |||||| || || | ||||| ||||||||||| | |||| Sbjct 1516 TGACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAGACC 1574 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || ||||||| || ||||| ||| |||| || | |||||||| |||||||| Sbjct 1575 AACAGCGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCCGACTACA 1634 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||| | || || ||||| ||| |||| Sbjct 1635 ACATCCAGAAGGAGTCAACCCTTCATCTGGTGCTGCG 1671 Score = 145 bits (160), Expect = 8e-30 Identities = 174/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||| ||||| || || || || || || || ||||| ||||||||| | || ||||| | Sbjct 540 GAAATATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGA-G 598 Query 40745 CCA-CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCG 40803 ||| |||||| | | | | |||||| || || | ||||| ||||||||||| | Sbjct 599 CCATCCGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCA 658 Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 |||||||| || ||||||| || || || |||||||| || | |||||||| ||| Sbjct 659 GACCAGCAGCGTCTCATCTTTGCTGGGAAGCAGCTGGAAGATGGCCGCACCCTGTCTGAC 718 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||| ||| |||| || ||||| || |||| || | || ||| Sbjct 719 TACAACATCCAGAAAGAGTCCACCCTTCATCTTGTCCTGCGTCTGCGTGGTGGC 772 Score = 140 bits (154), Expect = 3e-28 Identities = 157/205 (77%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| | || ||||| |||| | Sbjct 1229 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTGGAAGTCGA-GCCATC 1287 Query 40750 -GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| |||||| || || | ||||| ||||||||||| | |||| Sbjct 1288 AGACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCAGACC 1346 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || ||||||| || ||||| ||||| || || | |||||||| |||||||| Sbjct 1347 AACAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACA 1406 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||||| ||| || || Sbjct 1407 ACATCCAGAAGGAGAGCACCCTCCA 1431 Score = 134 bits (148), Expect = 1e-26 Identities = 156/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || |||| | Sbjct 1001 ATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAAGTTGA-GCCATC 1059 Query 40750 -GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| |||||| || || | ||||| |||||||||||| | |||| Sbjct 1060 TGACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACC 1118 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || ||||||| || ||||| ||||| || || | |||||||| |||||||| Sbjct 1119 AACAGCGTCTCATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACA 1178 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||||| | || || || Sbjct 1179 ACATCCAGAAGGAGTCAACACTCCA 1203 >seq1446 Length=3482675 Score = 134 bits (148), Expect = 1e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || ||||| || || || |||||||| ||||||||| |||| || || | Sbjct 1542119 AAATATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGCC 1542178 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | | | |||| || || | ||||| ||||||||||| | || Sbjct 1542179 TTCAGACACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAGA 1542238 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || |||| ||| ||||| |||||||| || | |||||||| |||||| Sbjct 1542239 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTA 1542298 Query 40866 CAACATCCAGAAGG 40879 |||||||||||||| Sbjct 1542299 CAACATCCAGAAGG 1542312 >seq1787 Length=2284422 Score = 116 bits (128), Expect = 4e-21 Identities = 102/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| || ||||| ||||||||||| || || || || |||||||| || |||| ||| Sbjct 1961078 GAGCCCCTCCTGCGTGAGAACCCCCGGCGCTTTGTCATCTTCCCCATCCAGTACCACGAC 1961019 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||| | ||||| || ||||| Sbjct 1961018 ATCTGGCAGATGTACAAGAAGGCTGAGGCATCCTTCTGGACAGCGGAGGAAGTAGACCTC 1960959 Query 116696 TCCAAGG 116702 ||||||| Sbjct 1960958 TCCAAGG 1960952 Score = 107 bits (118), Expect = 2e-18 Identities = 93/114 (82%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 116700 AGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGC 116759 ||||| | || |||||||| || |||||||| ||| | || ||||||||||| |||| Sbjct 1960605 AGGACTTGGGCCACTGGGAGAGCCTGAACGACGGTGAGAGACACTTCATCAAGCATGTGC 1960546 Query 116760 TGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTT 116813 ||||||| ||||| |||||||| || |||||||| ||||| ||||| ||| ||| Sbjct 1960545 TGGCCTTCTTCGCAGCCAGCGATGGTATCGTCAATGAGAACCTGGT-GAGTGTT 1960493 Score = 102 bits (112), Expect = 8e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 || || || || || ||||| ||||| | || || ||||| || ||||| ||| |||| Sbjct 1959523 TTTGCTGCTATTTTCTGGCTGAAGAAGAGAGGTCTGATGCCTGGGCTGACGTTCTCCAAC 1959464 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 ||||| ||| ||| |||||||||||||| || ||||||||||| || |||||| || Sbjct 1959463 GAGCTGATCAGCAGAGACGAGGGTCTGCACTGTGACTTTGCCTGCCTGATGTTCAGCCAC 1959404 Query 117206 TTGGTG 117211 |||||| Sbjct 1959403 TTGGTG 1959398 Score = 86.0 bits (94), Expect = 6e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 116819 CAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAAC 116878 || || |||||||| | ||||| |||||||||||||||| ||||||||||| |||||| Sbjct 1960329 CAAGAAGTGCAGGTTACAGAGGCCGGGTGCTTCTACGGCTTCCAGATCGCCATTGAGAAC 1960270 Query 116879 GTGCACTCGGAAATGTA 116895 | ||||| |||||||| Sbjct 1960269 ATCCACTCTGAAATGTA 1960253 >seq1554 Length=3048482 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 |||||||| | |||||||| | || |||| || ||||| |||||||| || | ||| Sbjct 444983 GGCATCCCTCCTGACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGC 445042 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||| ||||||||||||||||||||| |||| || || | ||| | ||| Sbjct 445043 ACCCTGTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGC 445096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515204335926080