Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq1531 86.0 4e-12 >seq1531 Length=8964412 Score = 86.0 bits (94), Expect = 4e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 75068 CTACGGCAGGGTGGCTCCCAGGTCCGGCCTGGCCCTGAAAAAATTTATAGACGTCGGTGC 75127 ||| ||||| ||||| || | ||||||||||| | |||||||| ||||| ||||| || Sbjct 381672 CTATGGCAGAGTGGCACCTCGATCCGGCCTGGCACACAAAAAATTCATAGATGTCGGAGC 381613 Query 75128 CGGGGTGGTGGACCCCGACTACAGGGGCAACCTCGGCGTCATACTGTTTAACTTTGGGTG 75187 |||||| | ||| || | | | |||||| | | ||||| |||| ||||||||| Sbjct 381612 CGGGGTAATTGACAGGGATTCCCGTGGCAACGTGAGTGTCATCATGTTCAACTTTGGGAA 381553 Query 75188 CGACCCCTTTCGGGTCAAGAGGGGCGACAGGATAGCCCAGCT 75229 || || || || | || ||| ||||||||||||| Sbjct 381552 TGAAGAGTTCAAAGTGAACAAAGGGGACCGGATAGCCCAGCT 381511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338755270969632