Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2197 100 3e-16 >seq2197 Length=5472366 Score = 100 bits (110), Expect = 3e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 || ||||||| ||| ||| | |||||||||||||||| |||||||| || || ||| Sbjct 5042519 CATGGTGTGAGGAACAGCCTGTTGTTGGCCCCCATGCCCACAGCCTCCACTGCACAAATC 5042578 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || || ||||||||||| |||| | | |||| |||| | |||| |||| ||||||| Sbjct 5042579 CTGGGGAACAACGAGTCCATCGAGGCTTACACCAGCAACATCTACACCAGGAGGGTGCTG 5042638 Query 95197 GCCGGGGAATTCC 95209 | || ||||||| Sbjct 5042639 TCTGGAGAATTCC 5042651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494708927235680