Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1531 131 2e-25 >seq1531 Length=8964412 Score = 131 bits (144), Expect = 2e-25 Identities = 520/801 (65%), Gaps = 28/801 (3%) Strand=Plus/Plus Query 101844 AAGGATTTGGACGATTGGAAGACTCTAAATGAAAATGAAAAGAAATTCATAAAATACATC 101903 ||||| |||||| |||||| || ||| | ||| || ||||| | ||||| || ||||| Sbjct 402751 AAGGACTTGGACCATTGGAGGAGTCTCACTGACAACGAAAAACACTTCATCAAGTACATT 402810 Query 101904 CTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTTGCT 101963 ||||||||||||| | ||||| || || ||||||| | | | || Sbjct 402811 TTGGCATTCTTTGCAGCTAGTGATGGTATCGTCAGTGAGAATCTGGTAGAGAGATTCTAC 402870 Query 101964 GATGAGGTGCAATCCTCTGAAGCGAGATCTTTCTATGCGTATCAA--TGTCATAATGAAA 102021 | |||||||||| | || || || | ||||||| | || || ||| ||| | Sbjct 402871 AAAGAGGTGCAATTGACCGAGGCCAGGTGCTTCTATGGCTTCCAGATTGCCAT--TGAGA 402928 Query 102022 TGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGA 102081 | ||| || | |||||| | || |||| || ||| ||||| ||||| Sbjct 402929 ACATCCATTCTGAAATGTACAGTCTCTTGATCGACACCTACATTGAGGATCCGCATGAGA 402988 Query 102082 AGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGG 102141 | ||||| || ||| | || ||| | || || ||| | | ||||| || || |||| Sbjct 402989 AAAAGCATCTGTTTAATGCAATCGAGACCACACCTTGTGTAAAGAAGAAGGCTGAGTGGG 403048 Query 102142 CTATGAAGTGGTTTGATACAAAGTCGCGTTCC---TTTGCTGAGCGACTCTTCGCATTTG 102198 | | | |||| ||| | | ||| || |||| || || | | || || | Sbjct 403049 CCCTCAGGTGGATTGG---AGACCTGCGAGCCACTTTTGGGGAACGTGTGGTTGCTTTCG 403105 Query 102199 CGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAG 102257 | ||| || || ||||| |||||||| ||||| ||| ||||| | ||| | |||||| Sbjct 403106 CAGCTGTGGAAGGGATCTTTTTCTCTGGGTCCTT-TGCAGCTATATTCTGGTTGAAGAAG 403164 Query 102258 CGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTC 102317 |||| | |||||||| || |||||||||||||| ||| | || ||||| | Sbjct 403165 AGAGGATTGATGCCAGGGCTGACTTTCTCCAACGAGCTGATCAGCAGAGATGAGGGGATG 403224 Query 102318 CACCAAGAGTTTGCG-GTGGAACTTTTCAAATTATTGCGTATTAAACCAA-CGACTGAGA 102375 ||| |||||||| || | ||| | || || | |||| ||| ||| Sbjct 403225 CACACTGAGTTTGCCTGTCTGATGTTT-AGCCACCTGGTTAACAGGCCAAGCGAGGCAGA 403283 Query 102376 CTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAG-AAGGGATTCATATTG---GAT 102431 |||||| ||| | | ||||| |||||||| ||| | || ||| || Sbjct 403284 -TATTCACCAGATTATAGACAGTGCCGTCAAGATTGAGCAAGAGTTT----TTGACAGAC 403338 Query 102432 GCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAATATATTGAGTAT 102491 |||||||| || || || |||||| || |||| | |||||||||| | Sbjct 403339 GCCCTTCCCGTGAAGCTGATTGGGATGAATCAAGACCTGATGAAACAGTATATTGAGTTT 403398 Query 102492 GTATCTGATAGATTGTTGAAGCAGA-TCGGGGTGCCTCCA-ATTTGGAACTCCAAGAATC 102549 ||| | |||||||||||| | ||| | | |||| | | |||| ||| | | || | Sbjct 403399 GTAGCAGATAGATTGTTG--GGAGACTTGATGTGCAGCAAGATTTACAACACTGAAAACC 403456 Query 102550 CATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGG 102609 | |||||||||||||||||||| ||| || || |||| |||||||| || |||| || Sbjct 403457 CCTTTGACTTCATGGAGAACATCTCCCTGGAGGGCAAGAGCAACTTCTTTGAGAAGAAGG 403516 Query 102610 TTGGGGACTATGGCAAGATGG 102630 | || || || ||||||| Sbjct 403517 TGGGAGAGTACCAGAAGATGG 403537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620724491581760