Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2009 84.2 3e-11 seq1665 84.2 3e-11 seq1543 84.2 3e-11 seq1446 84.2 3e-11 seq1125 84.2 3e-11 seq2197 82.4 9e-11 >seq2009 Length=1711188 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| |||||| Sbjct 1072509 TAGCTCAGTTGGTTAGAGCGTCGTGCTGATAACGCGAAGGTCGCGGGTTCGACCCCCGT 1072567 >seq1665 Length=2752246 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| |||||| Sbjct 2048363 TAGCTCAGTTGGTTAGAGCGTCGTGCTGATAACGCGAAGGTCGCGGGTTCGACCCCCGT 2048305 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| |||||| Sbjct 2057966 TAGCTCAGTTGGTTAGAGCGTCGTGCTGATAACGCGAAGGTCGCGGGTTCGACCCCCGT 2058024 >seq1543 Length=3076745 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| |||||| Sbjct 674827 TAGCTCAGTTGGTTAGAGCGTCGTGCTGATAACGCGAAGGTCGCGGGTTCGACCCCCGT 674769 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| |||||| Sbjct 681829 TAGCTCAGTTGGTTAGAGCGTCGTGCTGATAACGCGAAGGTCGCGGGTTCGACCCCCGT 681887 >seq1446 Length=3482675 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| |||||| Sbjct 1091799 TAGCTCAGTTGGTTAGAGCGTCGTGCTGATAACGCGAAGGTCGCGGGTTCGACCCCCGT 1091857 >seq1125 Length=391675 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| |||||| Sbjct 361381 TAGCTCAGTTGGTTAGAGCGTCGTGCTGATAACGCGAAGGTCGCGGGTTCGACCCCCGT 361439 >seq2197 Length=5472366 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||||||||| | ||||| | |||| |||| ||||| || ||||||||||||||||| Sbjct 5042623 GTAGATGTTGCTGGTGTAAGCCTCGATGGACTCGTTGTTCCCCAGGATTTGTGCAGTGGA 5042564 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844 |||||||||||||| |||| | || ||||| Sbjct 5042563 GGCTGTGGGCATGGGGGCCAACAACAGGCTGTT 5042531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588959008042400