Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1456 102 6e-17 >seq1456 Length=293654 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | | || | | |||| |||| ||| Sbjct 120078 TGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGC 120019 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | |||||| || || || || ||||| || || ||||| || || Sbjct 120018 TTGCCAGCGAAGATAAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTG 119959 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| |||| || ||||||||||||| || ||||| || Sbjct 119958 GCCTTCACGTTCTCGATGGTGTCTGACGGCTCAACTTCAAGAGTGATGGTCTTGCCTGTG 119899 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | ||||| || || ||||||||| Sbjct 119898 AGGGTTTTGACGAAAATCTGCATG 119875 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | ||| || || || || || || || || ||||| || | Sbjct 119646 CCTCCACGCAGACGGAGAACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 119587 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| |||| ||||| || ||||| || | |||||| || || || || Sbjct 119586 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGG 119527 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || ||||| || || || ||| |||| | || || |||| |||||| Sbjct 119526 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTTTCAATGGTATCTGACGGCTCCACT 119467 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || |||| || ||||| || | || || ||||||||||||||| Sbjct 119466 TCTAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACAAATATCTGCATG 119419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396267253183956