Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1648 98.7 1e-15 >seq1648 Length=77580 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 65025 GAAGGCGAAATGGGCAATGAAATGGTTTGACAC-AAAGTCTCGCTCCTTCGCCGAGCGCC 65083 ||||||| | ||||| || | ||| | | || |||| | | | ||||| ||||| | Sbjct 8516 GAAGGCGGACTGGGCGCTGCAGTGGATCGCCAGTAAAGACAC-CAGCTTCGGGGAGCGGC 8458 Query 65084 TTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTAT 65142 | | || || || |||||||| |||||||||| |||||||| ||| || |||| Sbjct 8457 TGGTCGCCTTCGCTGCCGTGGAGGGAGTCTTCTTCTCAGGGTCATT-TGCTGCCATTTTC 8399 Query 65143 TGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGA 65202 ||| | ||||| || || || ||||||||||| ||||||||||||||| ||| || Sbjct 8398 TGGCTAAAGAAACGCGGGCTGATGCCAGGCCTGACCTTCTCAAATGAACTAATTAGTCGT 8339 Query 65203 GATGAGGGTCTCCACCAGGAGTTTGCC 65229 || ||||| | ||| ||||| ||| Sbjct 8338 GACGAGGGCTTGCACTGTGAGTTCGCC 8312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596552388967040