Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1456 91.5 3e-13 >seq1456 Length=293654 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || ||||| | || || |||| |||| || || ||||||||||| | | Sbjct 119602 GATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGACG 119543 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| || || ||||| || || || || ||||| || || || ||||| || | Sbjct 119542 CTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTTTCAATGGT 119483 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 |||||||| || |||||||| || ||||| || || || | || || | ||||||||| Sbjct 119482 ATCTGACGGCTCCACTTCTAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACAAATATCTG 119423 Query 192534 CAT 192536 ||| Sbjct 119422 CAT 119420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984450887695800