Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq1654 107 2e-18 >seq1654 Length=2776044 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 152028 CAAGGAGTTGATATGAACTACTCTTGTCGTGCTGGTGCATGTTCCTCTTGTGCTGGTAAG 152087 |||||| |||| || |||||| || || || || ||||| ||| | ||||| |||||| Sbjct 142549 CAAGGACTTGACATCCCCTACTCATGCCGGGCGGGCGCATGCTCCACCTGTGCCGGTAAG 142490 Query 152088 ATTGTGAGTGGTACAGTTGATCAGAGTGACCAATCATTCTTGGATGATGACCAGATTGAA 152147 || | | || || || || ||||||||||| || ||| |||| ||||||||||| | Sbjct 142489 ATCGAGTCCGGCACCGTGGACCAGAGTGACCAGTCCTTCCTGGACGATGACCAGATGGCG 142430 Query 152148 TCAGGATTCGTGCTGACCTGTGTTGCATATCCAACTTCTGATGTCACCCTCATGACTGAA 152207 ||| | ||| ||||||||| |||| | ||||| || || | ||| || | Sbjct 142429 AAAGGGTACGTCCTGACCTGTATTGCCTGCCCAACCAGCGACGTGGTCATCACAACCCAC 142370 Query 152208 CAAGAGGAGTCGCTCTACT 152226 || |||||| | ||||||| Sbjct 142369 CAGGAGGAGGCACTCTACT 142351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549606543393760