Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq1654 89.7 6e-13 >seq1654 Length=2776044 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 161588 GACATCAACTACTCGTGTCGTGCAGGCGCTTGTTCGTCGTGCGCGGGAAAACTCGTCTCT 161647 |||||| |||||| || || || ||||| || || | || || || || ||| || Sbjct 142540 GACATCCCCTACTCATGCCGGGCGGGCGCATGCTCCACCTGTGCCGGTAAGATCGAGTCC 142481 Query 161648 GGCACCGTAGACCAAAGCGACCAGTCCTTCCTGGACGATGACCAAAT 161694 |||||||| ||||| || |||||||||||||||||||||||||| || Sbjct 142480 GGCACCGTGGACCAGAGTGACCAGTCCTTCCTGGACGATGACCAGAT 142434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557638311670560