Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq1654 96.9 4e-15 >seq1654 Length=2776044 Score = 96.9 bits (106), Expect = 4e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 167481 GACATCAACTACTCGTGCCGTGCAGGCGCTTGTTCGTCGTGCGCGGGAAAACTCATCTCT 167540 |||||| |||||| ||||| || ||||| || || | || || || || || || Sbjct 142540 GACATCCCCTACTCATGCCGGGCGGGCGCATGCTCCACCTGTGCCGGTAAGATCGAGTCC 142481 Query 167541 GGCACCGTAGATCAAAGCGATCAATCCTTCCTGGACGATGATCAAATTGCCGAAGGTTTC 167600 |||||||| || || || || || ||||||||||||||||| || || || |||| | | Sbjct 142480 GGCACCGTGGACCAGAGTGACCAGTCCTTCCTGGACGATGACCAGATGGCGAAAGGGTAC 142421 Query 167601 CTTCTCACCTGTGTGTCCTATCCAACCAGCGAC 167633 | || |||||| | ||| |||||||||||| Sbjct 142420 GTCCTGACCTGTATTGCCTGCCCAACCAGCGAC 142388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592181315076160