Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq2286 86.0 9e-12 >seq2286 Length=1332566 Score = 86.0 bits (94), Expect = 9e-12 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 8342 GTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTAC 8401 || |||||||| || || | ||| ||| | || |||||||| ||||||||| ||| || Sbjct 231007 GTGGCGCTCTTCACCATGCGGAAGCCCGCCTCCCCGCCGAACGTGCTGGGCCGCCACCAC 231066 Query 8402 CCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCG 8461 |||| ||| | ||| | || || || |||| ||||||||| | |||| |||| Sbjct 231067 TGCGGGCTGCACAGCGGGTTGGACAGCAGCCCCTTGACGGAGAACGGCCCGCCCATCTCG 231126 Query 8462 AGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTAC 8521 | ||| |||| | | || | | |||| |||| ||||||| | || |||| Sbjct 231127 ATGATGGTCTCGCTGGTGACGCTGCCGGGAGCAGGCTGCTCCACCATCAGCCCCACGTAC 231186 Query 8522 AGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCT 8581 |||||||| || || | || ||||| || || | |||||| |||||| ||| Sbjct 231187 AGCTCCACCGCGTCTATATCGCCGTACGCTTCCTCCAGCTGGGCAGCCATCTCCGCGTCT 231246 Query 8582 CC 8583 || Sbjct 231247 CC 231248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716856118104320