Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq263 149 7e-31 >seq263 Length=525514 Score = 149 bits (164), Expect = 7e-31 Identities = 139/174 (80%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| |||||| | |||||| ||||| || ||||||||||| ||||||||||| Sbjct 160634 AGACCTGTGATGTGGGCTATCATGTAAGTCAGGAGTGAGTAGCTGGCGATGTTGAAGGGT 160693 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || |||||| |||| ||||| |||||||||||||| || || || || ||| | Sbjct 160694 ACGCCAAGCCCCGTGTCTCCCGAACGCTGGTACAGCTGACACGACAGTTCTCCGTTACAC 160753 Query 145870 ACGTAGAACTGG-CACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 |||||||||||| || ||| ||||||||| ||||| ||||| |||||||| Sbjct 160754 ACGTAGAACTGGACAAAGG-CGTGGCAGGGGGGCAGCGCCATCTTAGGCAGGTC 160806 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC 146106 || || || |||||||||||||| || || || || || |||||||| ||| ||| Sbjct 162829 GCACCAAAATGCCTCCACTGGAAGCCATATACAGGACCAAGGTCCCCCTCCTCGTAGTGG 162888 Query 146107 CCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166 | ||| || | | | ||||| || | ||| |||||||| |||||||| | || Sbjct 162889 CTCAGTCCACGCTTGTCCAGGAAATCTCTGGAGCCGTTGGCATCCCAGATGTGTACCTTT 162948 Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGG 146226 | ||||||| || ||| | || | |||| || ||||| | ||||| ||| Sbjct 162949 TTGTCGGAGAGTTCCTTGCCATTGGTACAGCCCCGGACAAACCATAAGAGCTCCTCGGCT 163008 Query 146227 ACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCC 146273 ||||| |||||||| || | ||| || ||||||||||||||||| || Sbjct 163009 ACCCCTCTCCAGAACACACGCTTTGTAGTCAGCAGGGGGAACTGCCC 163055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073864367920