Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq173 91.5 2e-13 >seq173 Length=2587927 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 83243 GGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCAC 83302 ||||| |||||||||| ||||||||| || || || | |||||||||| | | Sbjct 1626764 GGCAGCTTCTCTCGTAGGTAGGCGAAGACAGGGTGGGCGTCGGACCCGTTGACCTGGACC 1626823 Query 83303 TTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAA 83362 ||| ||| | || || |||||| | ||||||||||| ||||||| ||| |||||| Sbjct 1626824 TTCGAGAACATGTCGAACTTGGGCTCGTAACCGTTCCCAGGTCGGACGTACTTTAGGGAA 1626883 Query 83363 GGCAAGATCTCGGCATTCTGGGCGTTTTCCTGG 83395 || |||||| |||| ||| ||||||||| Sbjct 1626884 TTCAGGATCTCCTCATTGGTGGCATTTTCCTGG 1626916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608793771235920