Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq30 114 1e-20 seq116 105 8e-18 seq1 98.7 1e-15 seq107 95.1 1e-14 seq224 93.3 5e-14 seq178 93.3 5e-14 seq37 93.3 5e-14 seq192 91.5 2e-13 seq134 91.5 2e-13 seq21 91.5 2e-13 seq183 82.4 9e-11 >seq30 Length=7729275 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||||||| | ||| |||||| || || ||||| |||| ||| || || | Sbjct 7571864 ACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7571923 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| ||||| ||||||||||| | || | || ||||| Sbjct 7571924 ATCTTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7571983 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | ||||| | ||||| || | ||||| Sbjct 7571984 GTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGCTCCACTTCTAGGGTGAT 7572043 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || ||||| |||||||| ||||| Sbjct 7572044 GGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 7572079 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||||||| | ||| |||||| || || ||||| |||| ||| || || | Sbjct 7573460 ACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7573519 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || || || ||||| ||||||||||| | || | || ||||| Sbjct 7573520 ATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7573579 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| || | | |||||| | || || |||| ||||| Sbjct 7573580 GTCTTGGATCTTGGCCTTGACGTTCTCGATTGTGTCGGATGGCTCAACCTCGAGGGTGAT 7573639 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || || || ||||| |||||||| ||||| Sbjct 7573640 GGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 7573675 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | ||||||||||| || || ||||| |||| ||| || || | Sbjct 7573004 ACGCAGAACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7573063 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || || || ||||| ||||||||||| | || | || ||||| Sbjct 7573064 ATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7573123 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | ||||| | ||||| || | ||||| Sbjct 7573124 GTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCTGATGGCTCCACTTCTAGGGTGAT 7573183 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || ||||| |||||||| ||||| Sbjct 7573184 GGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 7573219 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||||||| | ||| |||||| || || ||||| |||| ||| || || | Sbjct 7573232 ACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7573291 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || || || ||||| ||||||||||| | || | || ||||| Sbjct 7573292 ATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7573351 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | ||||| | ||||| || | ||||| Sbjct 7573352 GTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCTGATGGCTCCACTTCTAGGGTGAT 7573411 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || ||||| |||||||| ||||| Sbjct 7573412 GGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 7573447 Score = 105 bits (116), Expect = 8e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||||| ||||| || || ||||| |||| ||| || || | Sbjct 7572092 ACGTAGCACCAAATGGAGGGTGCTTTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACC 7572151 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| ||||| ||||||||||| | || | || ||||| Sbjct 7572152 ATCTTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7572211 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | ||||| | || || |||| ||||| Sbjct 7572212 GTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGCTCAACCTCGAGGGTGAT 7572271 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || || || || ||||| ||||| Sbjct 7572272 GGTCTTGCCTGTCAGGGTTTTGACGAAGATCTGCAT 7572307 Score = 105 bits (116), Expect = 8e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | ||| ||| || || || ||||| |||| ||| || || | Sbjct 7572776 ACGCAGAACCAAGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7572835 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| ||||| ||||||||||| | || | || ||||| Sbjct 7572836 ATCTTCAAGCTGCTTTCCTGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7572895 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| || | | ||||| || || || |||| ||||| Sbjct 7572896 GTCTTGGATCTTGGCCTTGACATTCTCGATTGTGTCAGACGGCTCAACCTCGAGGGTGAT 7572955 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || || || |||||||| ||||| Sbjct 7572956 GGTCTTGCCTGTCAGGGTTTTGACAAAGATCTGCAT 7572991 Score = 102 bits (112), Expect = 9e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | ||| ||| || || || ||||| |||| ||| || || | Sbjct 7572548 ACGCAGGACCAAGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7572607 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || || || ||||| ||||||||||| | || | || ||||| Sbjct 7572608 ATCTTCCAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7572667 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | |||||| | || || |||| ||||| Sbjct 7572668 GTCTTGGATCTTGGCCTTGACGTTTTCGATTGTGTCGGATGGCTCAACCTCGAGGGTGAT 7572727 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || ||||| |||||||| ||||| Sbjct 7572728 GGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 7572763 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | ||| ||| || || || ||||| |||| ||| || || | Sbjct 7572320 ACGCAGGACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7572379 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| ||||| ||||||||||| | || | || ||||| Sbjct 7572380 ATCTTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7572439 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | ||||| | || || |||| ||||| Sbjct 7572440 GTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGCTCAACCTCGAGGGTGAT 7572499 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || || || || ||||| ||||| Sbjct 7572500 GGTCTTGCCTGTCAGGGTTTTGACGAAGATCTGCAT 7572535 >seq116 Length=4760417 Score = 105 bits (116), Expect = 8e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | || |||||| || || ||||| || | ||| || || | Sbjct 3276327 ACGCAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276268 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| |||||||| ||||| ||||||||||| | || | || |||||| Sbjct 3276267 ATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTT 3276208 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| || | | ||||| | ||||| || | ||||| Sbjct 3276207 GTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCTGATGGCTCCACCTCAAGGGTGAT 3276148 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || ||||| || ||||| ||||| Sbjct 3276147 GGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 3276112 Score = 104 bits (114), Expect = 3e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| || | ||| | ||| |||||| || || ||||| || | ||| || || | Sbjct 3276099 ACGCAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276040 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | |||||| |||||||| ||||| ||||||||||| | || | || |||||| Sbjct 3276039 ATCTTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 3275980 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| || | | ||||| || || || || | ||||| Sbjct 3275979 GTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCAGACGGCTCAACCTCAAGGGTGAT 3275920 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 ||| || || || || ||||| |||||||| ||||| ||| Sbjct 3275919 GGTCTTCCCTGTGAGTGTCTTCACAAAGATCTGCATCTTT 3275880 Score = 102 bits (112), Expect = 9e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||| | ||| | ||| |||||| || || ||||| || | ||| || || | Sbjct 3277011 ACGCAGCACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276952 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | |||||| |||||||| ||||| ||||||||||| | || | || |||||| Sbjct 3276951 ATCTTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTT 3276892 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| || | | ||||| | || || || | ||||| Sbjct 3276891 GTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACCTCAAGAGTGAT 3276832 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || ||||| || ||||| ||||| Sbjct 3276831 GGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 3276796 Score = 98.7 bits (108), Expect = 1e-15 Identities = 167/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 42942 TTATTGTCCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGA 43001 || || || || |||| || | | ||||| ||| | ||| | ||| ||||| || Sbjct 3277265 TTGTTTTCTTAGAGTCCACCACGCAGACGCAGCACAAGATGAAGGGTGGATTCCTTCTGG 3277206 Query 43002 ATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGC 43061 || ||||| || | ||| || || | || || | |||||| |||||||| ||||| ||| Sbjct 3277205 ATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAACTGCTTCCCAGCGAAGATGAGACGC 3277146 Query 43062 TGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTG 43121 |||||||| | || | || ||||||||| ||| || |||| || | | ||| Sbjct 3277145 TGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTG 3277086 Query 43122 TCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGC 43181 || | || || || | |||||||| ||||| || || ||||| || ||||| ||| Sbjct 3277085 TCAGATGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGC 3277026 Query 43182 AT 43183 || Sbjct 3277025 AT 3277024 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | || |||||| || || ||||| || | ||| || || | Sbjct 3276783 ACGCAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276724 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | |||||| |||||||| ||||| ||||||||||| | || | || |||||| Sbjct 3276723 ATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTT 3276664 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| || | | ||||| | || || || | ||||| Sbjct 3276663 GTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCTGATGGCTCAACCTCAAGGGTGAT 3276604 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || || ||||| || ||||| ||||| Sbjct 3276603 GGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 3276568 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | ||| ||||| || || ||||| || | ||| || || | Sbjct 3279191 ACGCAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3279132 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | |||||| ||||| || ||||| ||||||||||| | || | || |||||| Sbjct 3279131 ATCTTCCAACTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 3279072 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | ||||| | |||||| || | ||||| Sbjct 3279071 GTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCTGATGGTTCCACTTCAAGGGTGAT 3279012 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||| || || || || ||||| || ||||| |||||| Sbjct 3279011 GGTCTTCCCTGTCAGGGTCTTCACGAAGATCTGCATT 3278975 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | || |||||| || || ||||| || | ||| || || | Sbjct 3276555 ACGCAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276496 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | |||||| |||||||| ||||| ||||||||||| | || | || |||||| Sbjct 3276495 ATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTT 3276436 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | ||||| | ||||| || | ||||| Sbjct 3276435 GTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCTGATGGCTCCACTTCAAGGGTGAT 3276376 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || || || ||||| || ||||| ||||| Sbjct 3276375 GGTCTTCCCTGTCAGGGTCTTCACGAAGATCTGCAT 3276340 >seq1 Length=7764355 Score = 98.7 bits (108), Expect = 1e-15 Identities = 79/93 (85%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 60057 AAAAATTT--TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||||||| ||||| | | ||||||||||||| ||||||||||||||||||||| || Sbjct 3507544 AAAAATTTGCTCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 3507603 Query 60115 ACTCACCACTATACTACCGAGGATT-GAATATA 60146 |||||||||||||||| | ||||| | ||||| Sbjct 3507604 ACTCACCACTATACTAACACGGATTAGCATATA 3507636 Score = 95.1 bits (104), Expect = 1e-14 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGG---CAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||||| | ||||| | | ||||||||||||| ||||||||||||||||||||| | Sbjct 3507851 AAAAATATAGTCCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 3507910 Query 60114 TACTCACCACTATACTACCGAGGATTGA 60141 ||||||||||||||||| | ||||||| Sbjct 3507911 TACTCACCACTATACTAACACGGATTGA 3507938 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 3508568 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 3508627 Query 60125 ATACTACCGAGGATTG 60140 |||||| | |||||| Sbjct 3508628 ATACTAACACGGATTG 3508643 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 3512807 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 3512866 Query 60125 ATACTACCGAGGATTG 60140 |||||| | |||||| Sbjct 3512867 ATACTAACACGGATTG 3512882 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 3517785 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 3517844 Query 60125 ATACTACCGAGGATTG 60140 |||||| | |||||| Sbjct 3517845 ATACTAACACGGATTG 3517860 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 3527913 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 3527854 Query 60125 ATACTACCGAGGATTG 60140 |||||| | |||||| Sbjct 3527853 ATACTAACACGGATTG 3527838 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 3539981 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 3540040 Query 60125 ATACTACCGAGGATTG 60140 |||||| | |||||| Sbjct 3540041 ATACTAACACGGATTG 3540056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3531110 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 3531051 Query 60125 ATACTACCGAGGATTG 60140 |||||| | |||||| Sbjct 3531050 ATACTAACACGGATTG 3531035 >seq107 Length=1704593 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1196868 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1196809 Query 60125 ATACTACCGAGGATTGA 60141 |||||| | ||||||| Sbjct 1196808 ATACTAACACGGATTGA 1196792 >seq224 Length=2258914 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 634494 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 634553 Query 60125 ATACTACCGAGGATTG 60140 |||||| | |||||| Sbjct 634554 ATACTAACACGGATTG 634569 >seq178 Length=642305 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 144222 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 144163 Query 60125 ATACTACCGAGGATTG 60140 |||||| | |||||| Sbjct 144162 ATACTAACACGGATTG 144147 >seq37 Length=6811162 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 101419 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 101478 Query 60125 ATACTACCGAGGATTG 60140 |||||| | |||||| Sbjct 101479 ATACTAACACGGATTG 101494 >seq192 Length=2243212 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135 ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| | | Sbjct 2027858 GGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACG 2027917 Query 60136 GATTG 60140 ||||| Sbjct 2027918 GATTG 2027922 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| ||| |||| | | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2028388 AAACATTGCCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2028447 Query 60117 TCACCACTATACTACCGAGGATT 60139 |||||||||||||| | ||||| Sbjct 2028448 TCACCACTATACTAACACGGATT 2028470 >seq134 Length=1076419 Score = 91.5 bits (100), Expect = 2e-13 Identities = 73/87 (84%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 60057 AAAAATTT--TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 ||||||| ||||| | | ||||||||||||| ||||||||||||||||||||| || Sbjct 103465 AAAAATTAACTCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 103524 Query 60115 ACTCACCACTATACTACCGAGGATTGA 60141 |||||||||||||||| | ||| ||| Sbjct 103525 ACTCACCACTATACTAACACGGACTGA 103551 >seq21 Length=10574652 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 6477114 TCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 6477055 Query 60125 ATACTACCGAGGATT 60139 |||||| | ||||| Sbjct 6477054 ATACTAACACGGATT 6477040 >seq183 Length=676410 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 60068 CCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATA 60127 || || | ||||||||||||| ||||||||||||||||||||| |||||| |||||||| Sbjct 117746 CCGCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCTCCACTATA 117687 Query 60128 CTA 60130 ||| Sbjct 117686 CTA 117684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571814755207440