Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq263 102 7e-17 >seq263 Length=525514 Score = 102 bits (112), Expect = 7e-17 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || |||| ||| || |||| || |||||||| | ||||||||||||||| || || Sbjct 160634 AGACCTGTGATGTGGGCTATCATGTAAGTCAGGAGTGAGTAGCTGGCGATGTTGAAGGGT 160693 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || || ||| |||| | || | |||||||||||| || ||||| || || | | Sbjct 160694 ACGCCAAGCCCCGTGTCTCCCGAACGCTGGTACAGCTGACACGACAGTTCTCCGTTACAC 160753 Query 21111 ACGTAAAACT-GACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 ||||| |||| |||| || |||| || || || || |||||| Sbjct 160754 ACGTAGAACTGGACA-AAGGCGTGGCAGGGGGGCAGCGCCATC 160795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427773925019040