Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq133 96.9 4e-15 >seq133 Length=5200453 Score = 96.9 bits (106), Expect = 4e-15 Identities = 74/88 (84%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 38514 GACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGCCTGCGGACGAT 38573 |||||||||| |||||||| |||| |||||||| ||||||||| || ||| |||||| Sbjct 3732549 GACCAGGTCAGATGTTTCTGGTGCGATGGCGGCCTGAAGGACTGGCAGGCTGGAGACGAT 3732608 Query 38574 CCGTGGGCGCAGCACGCGCGCTGGTTCG 38601 |||||| | ||||||||||||||| || Sbjct 3732609 CCGTGGACTGAGCACGCGCGCTGGTACG 3732636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537600525424080