Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq30 114 1e-20 seq116 111 2e-19 seq1 89.7 6e-13 seq107 87.8 2e-12 seq224 86.0 7e-12 seq192 86.0 7e-12 seq178 86.0 7e-12 seq37 86.0 7e-12 seq21 84.2 2e-11 seq134 82.4 8e-11 >seq30 Length=7729275 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||||||| | ||| |||||| || || ||||| |||| ||| || || | Sbjct 7571864 ACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7571923 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || ||||| ||||| ||||||||||| | || | || ||||| Sbjct 7571924 ATCTTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7571983 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | ||||| | ||||| || | ||||| Sbjct 7571984 GTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGCTCCACTTCTAGGGTGAT 7572043 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || ||||| |||||||| ||||| Sbjct 7572044 GGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 7572079 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||||||| | ||| |||||| || || ||||| |||| ||| || || | Sbjct 7573460 ACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7573519 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || || || ||||| ||||||||||| | || | || ||||| Sbjct 7573520 ATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7573579 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| || | | |||||| | || || |||| ||||| Sbjct 7573580 GTCTTGGATCTTGGCCTTGACGTTCTCGATTGTGTCGGATGGCTCAACCTCGAGGGTGAT 7573639 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || || || ||||| |||||||| ||||| Sbjct 7573640 GGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 7573675 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||| || | ||||||||||| || || ||||| |||| ||| || || | Sbjct 7573004 ACGCAGAACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7573063 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || || || ||||| ||||||||||| | || | || ||||| Sbjct 7573064 ATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7573123 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | ||||| | ||||| || | ||||| Sbjct 7573124 GTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCTGATGGCTCCACTTCTAGGGTGAT 7573183 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || ||||| |||||||| ||||| Sbjct 7573184 GGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 7573219 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||||||| | ||| |||||| || || ||||| |||| ||| || || | Sbjct 7573232 ACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7573291 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || || || ||||| ||||||||||| | || | || ||||| Sbjct 7573292 ATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7573351 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | ||||| | ||||| || | ||||| Sbjct 7573352 GTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCTGATGGCTCCACTTCTAGGGTGAT 7573411 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || ||||| |||||||| ||||| Sbjct 7573412 GGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 7573447 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||||| ||||| || || ||||| |||| ||| || || | Sbjct 7572092 ACGTAGCACCAAATGGAGGGTGCTTTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACC 7572151 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || ||||| ||||| ||||||||||| | || | || ||||| Sbjct 7572152 ATCTTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7572211 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | ||||| | || || |||| ||||| Sbjct 7572212 GTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGCTCAACCTCGAGGGTGAT 7572271 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || || || || ||||| ||||| Sbjct 7572272 GGTCTTGCCTGTCAGGGTTTTGACGAAGATCTGCAT 7572307 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||| || | ||| ||| || || || ||||| |||| ||| || || | Sbjct 7572776 ACGCAGAACCAAGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7572835 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || ||||| ||||| ||||||||||| | || | || ||||| Sbjct 7572836 ATCTTCAAGCTGCTTTCCTGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7572895 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| || | | ||||| || || || |||| ||||| Sbjct 7572896 GTCTTGGATCTTGGCCTTGACATTCTCGATTGTGTCAGACGGCTCAACCTCGAGGGTGAT 7572955 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || || || |||||||| ||||| Sbjct 7572956 GGTCTTGCCTGTCAGGGTTTTGACAAAGATCTGCAT 7572991 Score = 102 bits (112), Expect = 9e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||| || | ||| ||| || || || ||||| |||| ||| || || | Sbjct 7572548 ACGCAGGACCAAGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7572607 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || || || ||||| ||||||||||| | || | || ||||| Sbjct 7572608 ATCTTCCAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7572667 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | |||||| | || || |||| ||||| Sbjct 7572668 GTCTTGGATCTTGGCCTTGACGTTTTCGATTGTGTCGGATGGCTCAACCTCGAGGGTGAT 7572727 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || ||||| |||||||| ||||| Sbjct 7572728 GGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 7572763 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||| || | ||| ||| || || || ||||| |||| ||| || || | Sbjct 7572320 ACGCAGGACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 7572379 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || ||||| ||||| ||||||||||| | || | || ||||| Sbjct 7572380 ATCTTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTT 7572439 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | ||||| | || || |||| ||||| Sbjct 7572440 GTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCTGATGGCTCAACCTCGAGGGTGAT 7572499 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || || || || ||||| ||||| Sbjct 7572500 GGTCTTGCCTGTCAGGGTTTTGACGAAGATCTGCAT 7572535 >seq116 Length=4760417 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||| || | || |||||| || || ||||| || | ||| || || | Sbjct 3276327 ACGCAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276268 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| ||||| ||||||||||| | ||| | || |||||| Sbjct 3276267 ATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTT 3276208 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| || | | ||||| | ||||| || | ||||| Sbjct 3276207 GTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCTGATGGCTCCACCTCAAGGGTGAT 3276148 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || ||||| || ||||| ||||| Sbjct 3276147 GGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 3276112 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||| | ||| | ||| |||||| || || ||||| || | ||| || || | Sbjct 3277011 ACGCAGCACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276952 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | |||||| |||||||| ||||| ||||||||||| | ||| | || |||||| Sbjct 3276951 ATCTTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTT 3276892 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| || | | ||||| | || || || | ||||| Sbjct 3276891 GTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACCTCAAGAGTGAT 3276832 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || ||||| || ||||| ||||| Sbjct 3276831 GGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 3276796 Score = 102 bits (112), Expect = 9e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| || | ||| | ||| |||||| || || ||||| || | ||| || || | Sbjct 3276099 ACGCAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276040 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | |||||| |||||||| ||||| ||||||||||| | || | || |||||| Sbjct 3276039 ATCTTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 3275980 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| || | | ||||| || || || || | ||||| Sbjct 3275979 GTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCAGACGGCTCAACCTCAAGGGTGAT 3275920 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 ||| || || || || ||||| |||||||| ||||| || Sbjct 3275919 GGTCTTCCCTGTGAGTGTCTTCACAAAGATCTGCATCTT 3275881 Score = 102 bits (112), Expect = 9e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||| || | || |||||| || || ||||| || | ||| || || | Sbjct 3276783 ACGCAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276724 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | |||||| |||||||| ||||| ||||||||||| | ||| | || |||||| Sbjct 3276723 ATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTT 3276664 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| || | | ||||| | || || || | ||||| Sbjct 3276663 GTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCTGATGGCTCAACCTCAAGGGTGAT 3276604 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || ||||| || ||||| ||||| Sbjct 3276603 GGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 3276568 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||| || | || |||||| || || ||||| || | ||| || || | Sbjct 3276555 ACGCAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3276496 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | |||||| |||||||| ||||| ||||||||||| | ||| | || |||||| Sbjct 3276495 ATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTT 3276436 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | ||||| | ||||| || | ||||| Sbjct 3276435 GTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCTGATGGCTCCACTTCAAGGGTGAT 3276376 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || || || ||||| || ||||| ||||| Sbjct 3276375 GGTCTTCCCTGTCAGGGTCTTCACGAAGATCTGCAT 3276340 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||| | ||| | ||| ||||| || || ||||| || | ||| || || | Sbjct 3277239 ACGCAGCACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3277180 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | |||||| |||||||| ||||| ||||||||||| | || | || |||||| Sbjct 3277179 ATCTTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 3277120 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| || | | ||||| | || || || | ||||| Sbjct 3277119 GTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACCTCAAGGGTGAT 3277060 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || ||||| || ||||| ||||| Sbjct 3277059 GGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 3277024 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||| || | ||| ||||| || || ||||| || | ||| || || | Sbjct 3279191 ACGCAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 3279132 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | |||||| ||||| || ||||| ||||||||||| | || | || |||||| Sbjct 3279131 ATCTTCCAACTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 3279072 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | ||||| | |||||| || | ||||| Sbjct 3279071 GTCTTGGATCTTGGCCTTGACGTTTTCAATGGTGTCTGATGGTTCCACTTCAAGGGTGAT 3279012 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||| || || || || ||||| || ||||| |||||| Sbjct 3279011 GGTCTTCCCTGTCAGGGTCTTCACGAAGATCTGCATT 3278975 >seq1 Length=7764355 Score = 89.7 bits (98), Expect = 6e-13 Identities = 77/93 (83%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 56998 AAAAATTT--TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||||| ||||| | | | |||||||||| ||||||||||||||||||||| || Sbjct 3507544 AAAAATTTGCTCTCCGTGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 3507603 Query 57056 ACTCACCACTATACTACCGAGGATT-GAATATA 57087 |||||||||||||||| | ||||| | ||||| Sbjct 3507604 ACTCACCACTATACTAACACGGATTAGCATATA 3507636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 3507876 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 3507935 Query 57080 TGA 57082 ||| Sbjct 3507936 TGA 3507938 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 3508582 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 3508641 Query 57080 TG 57081 || Sbjct 3508642 TG 3508643 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 3512821 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 3512880 Query 57080 TG 57081 || Sbjct 3512881 TG 3512882 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 3517799 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 3517858 Query 57080 TG 57081 || Sbjct 3517859 TG 3517860 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 3527899 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 3527840 Query 57080 TG 57081 || Sbjct 3527839 TG 3527838 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 3539995 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 3540054 Query 57080 TG 57081 || Sbjct 3540055 TG 3540056 >seq107 Length=1704593 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 1196854 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 1196795 Query 57080 TGA 57082 ||| Sbjct 1196794 TGA 1196792 >seq224 Length=2258914 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 634508 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 634567 Query 57080 TG 57081 || Sbjct 634568 TG 634569 >seq192 Length=2243212 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 2027861 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 2027920 Query 57080 TG 57081 || Sbjct 2027921 TG 2027922 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 2028410 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 2028469 Query 57080 T 57080 | Sbjct 2028470 T 2028470 >seq178 Length=642305 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 144208 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 144149 Query 57080 TG 57081 || Sbjct 144148 TG 144147 >seq37 Length=6811162 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 101433 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 101492 Query 57080 TG 57081 || Sbjct 101493 TG 101494 >seq21 Length=10574652 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct 6477100 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAT 6477041 Query 57080 T 57080 | Sbjct 6477040 T 6477040 >seq134 Length=1076419 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| |||||||||||||||||| | ||| Sbjct 103489 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACACGGAC 103548 Query 57080 TGA 57082 ||| Sbjct 103549 TGA 103551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210097516320