Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq70 89.7 6e-13 >seq70 Length=4241797 Score = 89.7 bits (98), Expect = 6e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 164105 TACTCTTGTCGTGCTGGTGCTTGCTCCTCATGTGCAGGTAAAATTGTATCTGGAACTGTT 164164 ||||| || || || || || ||| || | || || ||||| || || ||||| || || Sbjct 4027346 TACTCCTGCCGGGCGGGCGCATGCACCACCTGCGCCGGTAAGATCGTGTCTGGCACCGTG 4027405 Query 164165 GATCAGAGTGATCAGTCATTCCTAGACGATGATCAGATTGCAGCAGGATTCGTGCTTACG 164224 |||||||| || ||| | ||||| || | || || || |||||||| ||||| || || Sbjct 4027406 GATCAGAGCGACCAGACCTTCCTGGATGCGGACCAAATGGCAGCAGGGTTCGTCCTGACC 4027465 Query 164225 TGTGTAGCATATCCAACATCTGATTGTGTTGTGGTTACTGATCAAGAGGAGAATCTCTA 164283 || || || || ||||| ||| || | ||| | ||||||||||| ||||| Sbjct 4027466 TGCGTGGCCTACCCAACCAGTGACCTGGTCATCACTACCCACCAAGAGGAGAACCTCTA 4027524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563206798032240