Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq30 206 3e-48 seq6 197 2e-45 seq116 194 2e-44 seq227 91.5 2e-13 seq201 91.5 2e-13 >seq30 Length=7729275 Score = 206 bits (228), Expect = 3e-48 Identities = 182/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| |||||||| || || || || |||||||||||||||||| |||| Sbjct 7572991 ATGCAGATCTTTGTCAAAACCCTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCGTCT 7572932 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || |||| |||||||| ||||| ||||||||||| || || || ||| Sbjct 7572931 GACACAATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 7572872 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || |||||||||||||| || ||||| |||| |||||| Sbjct 7572871 CAGCGTCTCATCTTCGCAGGAAAGCAGCTTGAAGATGGCCGCACCCTGTCTGACTACAAC 7572812 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || || ||||| ||||| ||| | ||||| | || || ||||| Sbjct 7572811 ATCCAGAAAGAGTCCACTCTCCACTTGGTTCTGCGTCTGCGTGGTGG 7572765 Score = 205 bits (226), Expect = 1e-47 Identities = 185/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171856 AGTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAG 171915 ||| | ||||| ||||||||||| ||||| ||||| || || |||||||||||||||||| Sbjct 7573681 AGTGGCATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTTGAG 7573622 Query 171916 TCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCC 171975 | || ||||||||||| ||| |||| |||||||| ||||| ||||||||||| || || Sbjct 7573621 CCATCCGACACAATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCA 7573562 Query 171976 GATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGAT 172035 || ||||| || || || ||||| || || ||||| |||||||| || ||||| |||| Sbjct 7573561 GACCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGAC 7573502 Query 172036 TACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||||| | || |||||||| || || || | || || | || || ||||| Sbjct 7573501 TACAACATCCAGAAGGAGTCCACCCTCCATTTGGTGCTGCGTCTGCGTGGTGG 7573449 Score = 203 bits (224), Expect = 4e-47 Identities = 181/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || |||||||||||||||||| | || Sbjct 7572763 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCATCC 7572704 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| ||| |||| |||||||| ||||| ||||||||||| || || || ||| Sbjct 7572703 GACACAATCGAAAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 7572644 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || || ||||| |||||||| || ||||| |||| |||||| Sbjct 7572643 CAGCGTCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 7572584 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || || ||||| ||||| ||| | || || | || || ||||| Sbjct 7572583 ATCCAGAAAGAGTCCACTCTCCACTTGGTCCTGCGTCTGCGTGGTGG 7572537 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || |||||||| || || || || |||||||||||||||||| | ||| Sbjct 7572535 ATGCAGATCTTCGTCAAAACCCTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCATCA 7572476 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| ||||| ||||||||||| || || || ||| Sbjct 7572475 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 7572416 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| |||||||| || ||||| |||| |||||| Sbjct 7572415 CAGCGTCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 7572356 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || || ||||| || || ||| | || || | || || ||||| Sbjct 7572355 ATCCAGAAAGAGTCCACCCTCCACTTGGTCCTGCGTCTGCGTGGTGG 7572309 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || |||||||| || || ||| | ||| Sbjct 7573219 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTAGAAGTGGAGCCATCA 7573160 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| ||||| ||||||||||| || || || ||| Sbjct 7573159 GACACCATTGAAAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 7573100 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || || ||||| |||||||| || ||||| |||| |||||| Sbjct 7573099 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 7573040 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||| || || ||| | ||||| | || || ||||| Sbjct 7573039 ATCCAGAAGGAGAGCACCCTCCACTTGGTTCTGCGTCTGCGTGGTGG 7572993 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || |||||||| || || ||| | ||| Sbjct 7573447 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTAGAAGTGGAGCCATCA 7573388 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| ||||| ||||||||||| || || || ||| Sbjct 7573387 GACACCATTGAAAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 7573328 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || || ||||| |||||||| || ||||| |||| |||||| Sbjct 7573327 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 7573268 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || || | || || | || || ||||| Sbjct 7573267 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCTGCGTCTGCGTGGTGG 7573221 Score = 170 bits (188), Expect = 3e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || |||||||| || || ||| | ||| Sbjct 7572079 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTAGAAGTGGAGCCATCA 7572020 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| ||||| ||||||||||| || || || ||| Sbjct 7572019 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 7571960 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| |||||||| || ||||| |||| |||||| Sbjct 7571959 CAGCGTCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 7571900 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || || | || || | || || ||||| Sbjct 7571899 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCTGCGTCTGCGTGGTGG 7571853 Score = 170 bits (188), Expect = 3e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || |||||||| || || || || |||||||||||||||||| | ||| Sbjct 7572307 ATGCAGATCTTCGTCAAAACCCTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCATCA 7572248 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| ||||| ||||||||||| || || || ||| Sbjct 7572247 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 7572188 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| |||||||| || ||||| |||| |||||| Sbjct 7572187 CAGCGTCTCATCTTCGCAGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAAC 7572128 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||| || || || | || ||| | || || ||||| Sbjct 7572127 ATCCAGAAGGAAAGCACCCTCCATTTGGTGCTACGTCTGCGTGGTGG 7572081 >seq6 Length=9188263 Score = 197 bits (218), Expect = 2e-45 Identities = 776/1206 (64%), Gaps = 17/1206 (1%) Strand=Plus/Minus Query 195647 TCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAA 195706 || |||||| ||| ||||||||||||||| ||||| ||| | | || | | || | Sbjct 7430480 TCGATGGTGCTGACTAAGATGAAGGAGACGGCGGAGGCTTACCTAGGCCAGCCCGTCCGA 7430421 Query 195707 GATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGAC 195766 || || || | || || || |||||||||| || || || || ||||| || || ||| Sbjct 7430420 GACGCCGTCATCACCGTTCCGGCTTACTTCAACGACTCGCAGCGCCAGGCCACCAAAGAC 7430361 Query 195767 GCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGC 195825 || | || || ||||| ||| |||||| |||| ||||| |||||||| || || || Sbjct 7430360 GCCGGGAGGATCGCCGGTCTCAAC-GTCTTAAGAATCATCAACGAACCAACCGCAGCCGC 7430302 Query 195826 AATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCT 195885 | || ||||| |||||||||||| | | ||| || || || ||||||| || | Sbjct 7430301 GCTCGCCTATGGCCTGGACAAGAACCTGAGTGGAGAGAAGAACGTCTTGATCTACGACTT 7430242 Query 195886 CGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAG-GTGGTA--TATTCGAAGT 195942 || || || ||||| || || || | || | || || | | || | | |||||||| Sbjct 7430241 GGGCGGCGGGACGTTCGACGTGTCCATCCTGACCATCGACGAGGGGCAGCTGTTCGAAGT 7430182 Query 195943 AAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCG 196002 | || || || || || ||||| || || ||||| ||||| | | || Sbjct 7430181 GCGCTCCACGGCAGGCGACACCCATCTGGGCGGGGAAGACTTCGACAACAGAATCGTCAA 7430122 Query 196003 TCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGG 196061 || || ||| || || ||| || ||| | || || || | | || || ||| Sbjct 7430121 CCACTTCGTC-GAAGAATTCAAACGCAAGTACAAAAAGGACTTGCGTTCCAACCCGCGGG 7430063 Query 196062 CTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTC 196121 | | ||||| || || || || ||||| || ||||| | || || || || | | Sbjct 7430062 CCATCCGTCGACTGAGAACGGCGTGTGAGCGGGCCAAGAGGACGCTGTCGTCCAGCACGG 7430003 Query 196122 AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCC 196181 | || | ||||| || || || || || || |||||||| | | | || | Sbjct 7430002 AGGCAGCCATCGAGATCGACTCTCTGCACGAAGGGATCGACTTCTACTCCAAGCTGACTC 7429943 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT---TAGGAAGTGTATGGAACCTGTTG 196238 | || | ||||||||| | ||||| |||| | | | | |||| || || | Sbjct 7429942 GGGCCAGGTTTGAAGAGCTGTGTTCTGACCTGTTCCGTGGCACG---CTGGAGCCCGTGG 7429886 Query 196239 AACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGG 196298 | | | || || ||||| || ||||| ||||| || | | || | ||| | || | Sbjct 7429885 AGAAGGCCCTCCGCGACGCCAAAATGGACAAGTCCCAGATCCACGAGGTCGTCTTGGTCG 7429826 Query 196299 GAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAA 196357 |||| || ||||||||||| ||||| || || | | ||| || |||||||| ||| Sbjct 7429825 GAGGGTCCACCCGTATTCCCAAGATCCAGAAGCT-CCTTCAAGATTTCTTCAACGGCAAA 7429767 Query 196358 GATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCT 196417 || | ||||| | |||||||| || || || || || || || || ||||| ||||| Sbjct 7429766 GAACTGAACAAGTCCATCAACCCTGACGAGGCCGTGGCGTACGGAGCAGCCGTGCAGGCA 7429707 Query 196418 GCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCA 196477 ||||| || || || || || | | | | || | || || | || || || Sbjct 7429706 GCTATCCTGTCTGGCGTGGAGGACGACGGGATAAAGGACGTCCTTCTCGTAGACGTCGCG 7429647 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || | || |||| | || || || || || || ||||| || | | || ||||| Sbjct 7429646 CCTCTCTCGTTGGGCATCGAGACGGCAGGCGGCGTCATGACCAAGCTAGTCGAACGGAAC 7429587 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597 || || || || | | || ||| | ||||| ||| || || ||||| Sbjct 7429586 ACGCGCATCCCCTACAAAACTGGCCAGACCTTCACCACGTACAGCGACAACCAGCCAGGC 7429527 Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657 || || || ||||| || || || ||| || | || || ||| | ||| || Sbjct 7429526 GTCACCATCCAGGTATACGAGGGCGAGCGCGCCATGACGAAAGACAACAACAGACTGGGT 7429467 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 ||||| ||| || |||| | || || | || || |||||||| | || | | Sbjct 7429466 TTGTTCGAACTGAGCGGTTTTCCGCCAGCGCCTCGCGGCGTGCCACAGATAGAAGTCTCC 7429407 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC-TGGCAA 196776 ||||| || ||||| || || || ||| | || | || | || ||| | | ||| Sbjct 7429406 TTCGACATCGACGCCAACGGCATCCTACAGGTTTCCGCCGTCGAGAAGAGTACGGGGCGC 7429347 Query 196777 ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACG 196836 | | | || || || ||||| || ||||| ||||| |||||||| || ||||| || Sbjct 7429346 AGC-AACAAAATCACCATCACCAACGAAAAGGGTCGGCTGTCTAAGGAAGACATTGAGCG 7429288 Query 196837 TATGGT 196842 ||||| Sbjct 7429287 GATGGT 7429282 >seq116 Length=4760417 Score = 194 bits (214), Expect = 2e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || ||||| || ||||||||| | || Sbjct 3279204 ATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACTCTTGAGGTTGAGCCATCT 3279263 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| ||||| ||||| |||||||||||||||||| Sbjct 3279264 GACACCATTGAAAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCACCCGATCAG 3279323 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||||| |||||||| || ||||| |||| |||||| Sbjct 3279324 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 3279383 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||| || || || || ||||| || | || || ||||| Sbjct 3279384 ATCCAGAAGGAATCCACCCTTCATCTTGTGCTGCGTCTGCGTGGTGG 3279430 Score = 190 bits (210), Expect = 3e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || |||||||| ||||| ||| | ||| Sbjct 3276112 ATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTGGAGCCATCA 3276171 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| ||||| ||||| ||||| ||||| || ||| Sbjct 3276172 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAG 3276231 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||||| |||||||| || ||||| | || |||||| Sbjct 3276232 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 3276291 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||||||||| || ||| | ||||| | || || |||||| Sbjct 3276292 ATCCAGAAGGAGTCTACCCTCCACTTGGTTCTGCGTCTGCGTGGTGGT 3276339 Score = 188 bits (208), Expect = 9e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || |||||||| ||||||||| | ||| Sbjct 3276568 ATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCATCA 3276627 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| ||||| ||||| ||||| ||||| || ||| Sbjct 3276628 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAG 3276687 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||| | |||||||| || ||||| | || |||||| Sbjct 3276688 CAGCGTCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCCGACTACAAC 3276747 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | ||||| | || || ||||| Sbjct 3276748 ATCCAGAAGGAGTCTACCCTCCACTTGGTTCTGCGTCTGCGTGGTGG 3276794 Score = 185 bits (204), Expect = 1e-41 Identities = 180/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| ||||| ||||| || || || || |||||||| || || ||| Sbjct 3276335 GTGGTATGCAGATCTTCGTGAAGACCCTGACAGGGAAGACCATCACCCTTGAAGTGGAGC 3276394 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||| || || ||| |||| |||||||| ||||| ||||| ||||| ||||| | Sbjct 3276395 CATCAGACACCATTGAAAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAG 3276454 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || ||||| || ||| | |||||||| || ||||| | || | Sbjct 3276455 ACCAGCAGCGTCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCCGACT 3276514 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || ||||||||||| || ||| | ||||| | || || ||||| Sbjct 3276515 ACAACATCCAGAAGGAGTCTACCCTCCACTTGGTTCTGCGTCTGCGTGGTGG 3276566 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || || || || || || |||||||| ||||||||| |||| Sbjct 3275884 ATGCAGATCTTTGTGAAGACACTCACAGGGAAGACCATCACCCTTGAGGTTGAGCCGTCT 3275943 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| || ||||| ||||| ||||| ||||| || || || ||| Sbjct 3275944 GACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 3276003 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||| | |||||||| || ||||| | || |||||| Sbjct 3276004 CAGCGTCTCATCTTCGCTGGGAAGCAGTTGGAAGATGGCCGCACCCTGTCCGACTACAAC 3276063 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || || ||||| || | || || ||||| Sbjct 3276064 ATCCAGAAGGAGTCCACCCTTCATCTTGTCCTGCGTCTGCGTGGTGG 3276110 >seq227 Length=1676436 Score = 91.5 bits (100), Expect = 2e-13 Identities = 129/181 (71%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 195333 GTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTA 195392 ||||||| || | | || | ||||| || || ||| | || || || |||||||| | Sbjct 1106862 GTGTTGGAGTGTACAAGAACGGACGTGTGGACATCATCGCCAACGATCAGGGAAACCGAA 1106921 Query 195393 CAACTCCATCGTACGTTGCCTTTACAGATAA---TGAACGTCTCGTTGGAGATGCCGCAA 195449 || || || ||||| ||||| || | | ||| |||||||| ||||||||||| | Sbjct 1106922 TCACCCCGTCTTACGTCGCCTTCACGGCGGAGGGTGAGCGTCTCGTCGGAGATGCCGCCA 1106981 Query 195450 AAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTC 195509 | || ||| ||| ||||| || || |||||||||| |||||||| ||||||| Sbjct 1106982 AGAACCAGCTGACTACCAACCCCGAGAACACCGTCTTTGACGTCAAGCGTCTGATTGGTC 1107041 Query 195510 G 195510 | Sbjct 1107042 G 1107042 >seq201 Length=905327 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 78617 TGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATATGCTATACAAAGAC 78676 ||| | ||||| ||| | || || ||||| || | ||| || ||||| ||||| || Sbjct 244675 TGGTATGCTATCATCGAGGCCCAGACGGAGACAGGAAACCCCTACATGCTGTACAAGGAT 244734 Query 78677 AGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGC 78736 ||| ||||| |||||||||||| ||||||| || |||||| || ||||| ||| Sbjct 244735 GCCTGCAACAGCAAGTCTAACCAACAGAACCTCGGCACCATCAAGTGCAGCAACCTCTGC 244794 Query 78737 ACAGAAATTCTGGAATACAC 78756 ||||| ||| |||| ||||| Sbjct 244795 ACAGAGATTGTGGAGTACAC 244814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859127134560