Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq70 104 3e-17 >seq70 Length=4241797 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 152045 CTACTCTTGTCGTGCTGGTGCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGT 152104 |||||| || || || || || |||||| | || || |||||||| ||| ||| || || Sbjct 4032330 CTACTCCTGCCGAGCGGGCGCGTGTTCCACCTGCGCCGGTAAGATCGTGTCTGGCACCGT 4032271 Query 152105 TGATCAGAGTGACCAATCATTCTTGGATGATGACCAGATTGAATCAGGATTCGTGCTGAC 152164 |||||||| ||||| || ||| ||||||| ||||| || | | |||| | ||| ||||| Sbjct 4032270 GGATCAGAGCGACCAGTCCTTCCTGGATGACGACCAAATCGCAGCAGGGTACGTCCTGAC 4032211 Query 152165 CTGTGTTGCATATCCAACTTCTGATGTCACCCTCATGACTGAACAAGAGGAGTCGCTCTA 152224 ||| || || ||||| || | | ||| || | ||||||||||| ||||| Sbjct 4032210 CTGCGTGGCCCGCCCAACCAGCGACCTGGTCATCACTACCCACCAAGAGGAGTCCCTCTA 4032151 Query 152225 CT 152226 || Sbjct 4032150 CT 4032149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549619665628560