Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq14018 107 4e-19 >seq14018 Length=1105 Score = 107 bits (118), Expect = 4e-19 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 21451 GGATTTAGTTTAACTGCATCCTCTAAATGGTCGGGTGCAAAGTGCGCATATCGCATGGTC 21510 ||||| ||| | | ||||| | |||||| || || |||| | || || | ||||||| Sbjct 202 GGATTGAGTCTGGCAGCATCTTTTAAATGCTCAGGATCAAACTTTGCGTACCTCATGGTC 143 Query 21511 ATTTTTATATCTGTATGGCCGAGTACGCGCTGCAACACCAAAATATTACCGCCATTCATC 21570 || ||||| | ||| ||||||| |||| |||| ||| || |||||||||||| Sbjct 142 ATGGCAATATCAGAATGACCGAGTATTTTTTGCAGTACCAGAATGTTGCCGCCATTCATC 83 Query 21571 ATAAAGTGACTAGCGAAGGTGTGACGTAAAACGTGGGTAAGTTGTCCTGCCGGTAGTTCG 21630 |||||||| || || ||||| || ||||| |||||| | |||||| |||| | | Sbjct 82 ATAAAGTGGCTGGCAAAGGTATGCCGTAATACGTGGCTTGCCTGTCCTTTGGGTAAATGG 23 Query 21631 ATACCTG 21637 ||||||| Sbjct 22 ATACCTG 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97851021338796