Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq16762 84.2 4e-11 >seq16762 Length=602608 Score = 84.2 bits (92), Expect = 4e-11 Identities = 121/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 189469 GCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGAT 189528 |||| || ||| ||||| || ||||| |||| | || ||||| ||||| |||||||| Sbjct 343818 GCAGTTGTTGATTGAAGGCAAGATGCACGGTTTCCTGCGCATGTACTGGGCGAAGAAGAT 343759 Query 189529 ACTTGAATGGACTAGAACACCTG-AAGACGCTTTGAGTTATAGTATCTATTTGAACAACA 189587 |||||||||||| ||| || | |||| | || ||| | | || || | ||| | | Sbjct 343758 CCTTGAATGGACTGAAACGCCGGAAAGAGGTTTGGAGGAAGCG-ATTTACCTCAACGATA 343700 Query 189588 AGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTT-GTAT 189633 ||||| || || || |||||||||||| || || |||| |||| Sbjct 343699 AGTACAGTCTGGATGGACGGGATCCTAACGGTTATGTTGGTTCGTAT 343653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922956734212120