Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq13439 91.5 1e-13 seq18747 82.4 5e-11 >seq13439 Length=213493 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | |||||||| ||| | || || ||||| ||||||||||| | Sbjct 37615 CCTCCTCTCAGACGCAGCACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCACTC 37556 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | ||||||||| || || || | | |||||| || ||| Sbjct 37555 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGG 37496 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | |||| ||| | | || || Sbjct 37495 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATCGTATCAGATGGCTCCACC 37436 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| ||||| || || || |||||||||||||||||| Sbjct 37435 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATC 37388 >seq18747 Length=106157 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 |||||||| ||| | || |||||||| ||||||||||| ||| ||| | || Sbjct 24099 CAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTCAGGGTGCGGCCATC 24040 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| |||||||| || || || | | |||||| || ||| | || |||||||| Sbjct 24039 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 23980 Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 ||| || ||||| | || | || | |||| | || || || | || |||| Sbjct 23979 CTGGATC-TTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGG 23921 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | ||||| ||||| || || |||||||||||||| Sbjct 23920 TCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 23887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322990089435680