Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq20156 87.8 4e-12 >seq20156 Length=513389 Score = 87.8 bits (96), Expect = 4e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 94411 TATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCACTCG 94470 || ||||| || | || | |||||||||||| |||||| |||||||||| |||| Sbjct 226805 TACTTCTCATAAAGAGCTTCAAACTCTTCGCCCCAGACGTCACTGAGGCCAGGGCTCTCG 226746 Query 94471 TGGGGGCACATCAGGGACCAAT-TCTTCCCAGCCTTCACTCTCTCCATGAAGAGATCAGA 94529 ||||| ||||| || ||||||| || | | || |||| || |||||| ||||||| Sbjct 226745 TGGGGACACATGAGCGACCAATCTCCGTTCTG-CTCAACTCGCTTCATGAACAGATCAGG 226687 Query 94530 TACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATTACCGGCATTCTT 94586 | ||| | || ||| |||||||||| ||| || || || |||| ||||| Sbjct 226686 AATCCAAAGGGCGTAGAACAGATCCCTCGCTCTCTGTTCCTCCTTGCCGGTGTTCTT 226630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989320237826865