Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq14018 104 5e-18 >seq14018 Length=1105 Score = 104 bits (114), Expect = 5e-18 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 715 GAAAGCGGGTTGAATTTGACCGCACTTTCTAAGTGCGAAGGGGCGAAGTGCGCATAACGC 774 ||||| || |||| | || | ||| || ||| ||| ||| | || | || || | | Sbjct 208 GAAAGTGGATTGAGTCTGGCAGCATCTTTTAAATGCTCAGGATCAAACTTTGCGTACCTC 149 Query 775 ATCGTCATTTCGATAGTTGAATGACCGAGGATTTCTTTCAACACTAAAATATTCCCACCG 834 || ||||| | ||| ||||||||||| |||| || || || | ||| || || || Sbjct 148 ATGGTCATGGCAATATCAGAATGACCGAGTATTTTTTGCAGTACCAGAATGTTGCCGCCA 89 Query 835 TTCATCATAAAATGGCTGGCGAACGTATGGCGCAAAACGTGGGTTAGTTGCCCTTTGGGT 894 ||||||||||| |||||||| || ||||| || || |||||| || || ||||||||| Sbjct 88 TTCATCATAAAGTGGCTGGCAAAGGTATGCCGTAATACGTGGCTTGCCTGTCCTTTGGGT 29 Query 895 AA 896 || Sbjct 28 AA 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100679122524420