Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq1283 127 6e-25 >seq1283 Length=34873 Score = 127 bits (140), Expect = 6e-25 Identities = 255/376 (68%), Gaps = 13/376 (3%) Strand=Plus/Plus Query 22348 AACGTTAACGCCGCAAATCAGTATGCACGTGACGTGGTTCGCGGAAAAATTCAGGTTTGC 22407 || ||||| | || |||| ||||| || || || || |||| ||||| | ||| Sbjct 504 AATGTTAATTCGGCCAATCGTTATGCGCGGGATGTAGTCAGCGGCAAAATCATTGCCTGC 563 Query 22408 CGTTATGTCGTTCTGGCCTGCCAGCGTCACCTTGATGACCTGGAAAACTCAGCTaaaaaa 22467 |||||||| ||||| || || |||||||| ||||| |||| ||| || | |||||| Sbjct 564 CGTTATGTTCGCCTGGCTTGTCAACGTCACCTGGATGATCTGGGAAATTC--CAAAAAAA 621 Query 22468 a--aCTATCCGTTTAAATTTGATAAGGATAAAGCTGAGCGTGTGGCGAAATTTATCCAGC 22525 | | || || | ||| |||| || |||||||| || | |||||||| |||| Sbjct 622 AGGATTACCCCTACCGATTCGATAGAGACAAAGCTGAACGAGCCTGTAAATTTATTCAGC 681 Query 22526 TTTTGCCACACACCAAAGGGGAGTGGGCATTTAAACG-------GA--TGCCCATTACGC 22576 || | || || |||||||| ||||||||| || || || || || |||| Sbjct 682 TTCTCCCCCATACCAAAGGAGAGTGGGCAAGAAAGCGCGGGCCTGAAGGGCTAATAACGC 741 Query 22577 TTGAACCCTGGCAGTTGTTCTGTATTTGTGTTGTGTTTGGGTGGGTGAGAAAAAAGAGCG 22636 | ||| |||||| ||| ||| | | |||||||| ||||| ||| | | Sbjct 742 TGGAAAGCTGGCAACGGTTTATTATCTCGGCGGTGTTTGGCTGGGTTTTTAAATCAACGG 801 Query 22637 GCCTGCGTCGATTTCGCGAGGCTTACAACGAAATACCCCGTAAAAACGGGAAATCAGCAA 22696 || | ||||| || | || | ||| |||||||| | || ||||| || ||||| |||| Sbjct 802 GCTTACGTCGTTTCAGTGAAGTTTATAACGAAATTTCACGGAAAAATGGTAAATCCGCAA 861 Query 22697 TGTCTGCTGGCGTTGG 22712 | |||| || ||||| Sbjct 862 TAACTGCGGGTGTTGG 877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136084773905982