Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_004456.1 Length=43198 Score E Sequences producing significant alignments: (Bits) Value seq2845 80.6 7e-11 >seq2845 Length=23415 Score = 80.6 bits (88), Expect = 7e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 39081 CCATCTGGTTAAAGGCATTGATGTATGCCTCTTTGATGGCGGCGGCCTGCTTGCCAGTGA 39140 ||||||||||||||||||| ||||| |||||||| ||||||||| | ||||| |||| Sbjct 23212 CCATCTGGTTAAAGGCATTAATGTAGGCCTCTTTCCAGGCGGCGGCTTTTTTGCCGGTGA 23153 Query 39141 AGCCCAT 39147 ||||||| Sbjct 23152 AGCCCAT 23146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138077881415760