Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq16867 107 4e-19 seq14711 107 4e-19 >seq16867 Length=7440 Score = 107 bits (118), Expect = 4e-19 Identities = 253/378 (67%), Gaps = 12/378 (3%) Strand=Plus/Minus Query 2138 GGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGGCTCTGTGAGGCCATACCTGATGCCAC 2197 ||||||||||||||||||||| || | | |||| |||||| ||| ||||| Sbjct 1581 GGACGGGGTGGAGAAATAGGTTTTCCGGAACCGTTTCTGGCTGGCCATGGCTGCGGCCAC 1522 Query 2198 CTTACGCAGTACCTGAAAATTCGGGATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTT 2257 ||| |||| | ||||| | || |||||||| ||| || | || | | ||||| Sbjct 1521 CTTGTTCAGTTTTTCAAAATCCCGGGTCCAGAAATACTCATCAAAATAGAAATTTCCGTT 1462 Query 2258 ATGGCTCTGTGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGC---GCCGTTAT- 2313 | |||||| ||||| |||| ||||||| ||||||| || || ||||||| Sbjct 1461 GTAGCTCTGAGCGGTCATGGAATTGGTGCTGAGAAAATAGAGGCAGGCCAGCCCGTTATC 1402 Query 2314 --TGCCCAGGACAATCGGGTC---ACCGGTCAGGTCAACGTC-AACCAGAC--GGGCAAA 2365 | ||| |||| ||| ||| |||| || || ||||| | ||||| Sbjct 1401 GGTCATCAGCTCAATTTTGTCTTTACCTTTCAGCTCTTTATCAAACCAATCTAAAGCAAA 1342 Query 2366 GGCGATGATGTATTCGCGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTG 2425 | |||| || || |||||||| | |||||| | | | ||| || | ||||||||| Sbjct 1341 CCCTTTGATATAATCCCGGAACACCTCCGCCTGGGCTCTGGAGGCGGAGATAAAAATCTG 1282 Query 2426 GTTATGACCGGTTTTCAGGGCACGCAGCAGCGCCTCGCGGGAAAAATAAAACGTCGCGCC 2485 ||| | ||||| | ||||||| || || |||||| || ||||| || || Sbjct 1281 GTTCTCTCCGGTCTGCAGGGCATCCACCAACGCCTCCGCCGAGAAATAGCGGGTGAACCC 1222 Query 2486 AATCTGGCGGGATTTCAG 2503 ||||||||||||||||| Sbjct 1221 GATCTGGCGGGATTTCAG 1204 >seq14711 Length=7958 Score = 107 bits (118), Expect = 4e-19 Identities = 253/378 (67%), Gaps = 12/378 (3%) Strand=Plus/Plus Query 2138 GGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGGCTCTGTGAGGCCATACCTGATGCCAC 2197 ||||||||||||||||||||| || | | |||| |||||| ||| ||||| Sbjct 757 GGACGGGGTGGAGAAATAGGTTTTCCGGAACCGTTTCTGGCTGGCCATGGCTGCGGCCAC 816 Query 2198 CTTACGCAGTACCTGAAAATTCGGGATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTT 2257 ||| |||| | ||||| | || |||||||| ||| || | || | | ||||| Sbjct 817 CTTGTTCAGTTTTTCAAAATCCCGGGTCCAGAAATACTCATCAAAATAGAAATTTCCGTT 876 Query 2258 ATGGCTCTGTGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGC---GCCGTTAT- 2313 | |||||| ||||| |||| ||||||| ||||||| || || ||||||| Sbjct 877 GTAGCTCTGAGCGGTCATGGAATTGGTGCTGAGAAAATAGAGGCAGGCCAGCCCGTTATC 936 Query 2314 --TGCCCAGGACAATCGGGTC---ACCGGTCAGGTCAACGTC-AACCAGAC--GGGCAAA 2365 | ||| |||| ||| ||| |||| || || ||||| | ||||| Sbjct 937 GGTCATCAGCTCAATTTTGTCTTTACCTTTCAGCTCTTTATCAAACCAATCTAAAGCAAA 996 Query 2366 GGCGATGATGTATTCGCGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTG 2425 | |||| || || |||||||| | |||||| | | | ||| || | ||||||||| Sbjct 997 CCCTTTGATATAATCCCGGAACACCTCCGCCTGGGCTCTGGAGGCGGAGATAAAAATCTG 1056 Query 2426 GTTATGACCGGTTTTCAGGGCACGCAGCAGCGCCTCGCGGGAAAAATAAAACGTCGCGCC 2485 ||| | ||||| | ||||||| || || |||||| || ||||| || || Sbjct 1057 GTTCTCTCCGGTCTGCAGGGCATCCACCAACGCCTCCGCCGAGAAATAGCGGGTGAACCC 1116 Query 2486 AATCTGGCGGGATTTCAG 2503 ||||||||||||||||| Sbjct 1117 GATCTGGCGGGATTTCAG 1134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98183739125340