Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq3353 143 1e-29 >seq3353 Length=2286 Score = 143 bits (158), Expect = 1e-29 Identities = 248/358 (69%), Gaps = 2/358 (1%) Strand=Plus/Minus Query 3469 CCCGTCGACCTCCCTCACCCATTGCGGATCGCGCCCGACGCGGATCGGCTTACGGTGGGT 3528 ||| || |||| | | ||||||| ||| ||| |||| ||| | || |||| || Sbjct 357 CCCCTCCACCTTCTTGACCCATTCCGGGTCGTGCCCCTGGCGCACATGCCCTCGGTACGT 298 Query 3529 TCCCGCTAT-CCACCCCTGACACTGCCGGCGTATCGCGGCCTTGACGCGCTTGCTCTTGG 3587 || | | | ||| |||| ||| | || | || ||| || || ||||| ||||| | Sbjct 297 GCC-GTTCTGCCATCCCTCGCACAGGCGCCTAATGCTGGCTTTCACCCGCTTACTCTTCG 239 Query 3588 TGTCCGATTCCTCGTGCGCCCGGATCATGACGAGCAGGCTGTACACGAGGTCCATCGGCT 3647 |||| ||| || ||||| |||||||| || ||||||||||| || || ||||| || | Sbjct 238 TGTCGCTTTCTTCATGCGCGCGGATCATCACCAGCAGGCTGTAGACCAGATCCATGGGGT 179 Query 3648 GGGCGCGCAGCTTCTCCCGGTTGTACTCGCGGCCGTCGCTGGCCGTGACGACGGTGATGC 3707 | ||| ||| |||| | |||||||| || ||||| |||||||||| Sbjct 178 TTTCTTTGAGCCGGGTGCGGCTGTAGGCCTTTCCGTCGCTCGCTGTGACCACGGTGATGC 119 Query 3708 CGGCGCCGACAATCTGACTGAGCTGGGCCTGCGCCTGGATGGGTTCCGCGCGGCTCAGGC 3767 | || |||||||| || || ||||| |||||||||||||| ||||| |||| Sbjct 118 CCGCATTTACAATCTGGGCCAGTTGCGCCTGGGCCTGGATGGGTTCGGCGCGAGAGAGGC 59 Query 3768 GATCGAGCCCTTCGACGATGAGAACGGAGCCGGTCGGAACCCGGCCATCCTCGACGGC 3825 | || ||||| || ||||| || || || || ||| || || || ||||| ||||| Sbjct 58 GGTCCAGCCCCTCCACGATCAGCACAGATCCATGCGGTACACGTCCGTCCTCTACGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204245803088769