Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq3221 86.0 1e-12 >seq3221 Length=22303 Score = 86.0 bits (94), Expect = 1e-12 Identities = 167/247 (68%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 3935 CTGATGTCCTTCTCTTGACTGATGTCTTTGAAAACTTTAGACGTAGTTGTTTCAAGACAT 3994 ||||||| | |||||| ||||||||||||| ||||||||| | ||| ||||| | Sbjct 7448 CTGATGTTTTGCTCTTGGCTGATGTCTTTGAGAACTTTAGAGATGTGTGTAGCAAGAACT 7389 Query 3995 ACAATTTAGACGCACTACACTTTTATACAGCACCAGGTCTTTCGAACGCTGCAATGTTAA 4054 | ||||||| || | | ||||||||| ||||| || || | |||| | || | Sbjct 7388 ATGGTTTAGACCCAGCATGGTATTATACAGCTCCAGGCCTAGCGTGGGATGCAGTCTTGA 7329 Query 4055 AGCATACTGAAGTAGAACTTGAACTGTTAACTGATCCTGAGATGCTTCTTTTCATTGAAA 4114 || || | || |||| | || | | ||||| || |||||||| | |||| | Sbjct 7328 AGATAACAGGGGTGCAACTAGCGTTGCTGTCAGATCCAGACATGCTTCTCATGGTTGAGA 7269 Query 4115 AGGGTGTTCGCGGTGGGGTATCGATGTGTGCTAATAGACATGCTGAAGCTAACAACCGGT 4174 ||||| || | ||||| | || ||| | |||| ||| |||| || |||| || Sbjct 7268 AGGGTATTAGAGGTGGTATCTCAATGATTAGCCATAGGTATGGGAAAGCAAATAACCCGT 7209 Query 4175 ATATGGG 4181 | ||||| Sbjct 7208 ACATGGG 7202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97950196832862