Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq20156 98.7 3e-15 >seq20156 Length=513389 Score = 98.7 bits (108), Expect = 3e-15 Identities = 172/248 (69%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 ||||| || |||||||| || || || ||||| || || || ||||||| || | Sbjct 226559 AGCGCCCTGGAGCGTTTGCCATCTACCTGGAGCCATGGCACGCAGACGTTTTTGATTTCC 226618 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 | || || || ||||| || || |||||| | | || | ||||||||||| || | Sbjct 226619 TCGATTGTCGCAAGAACACCGGCAAGGAGGAACAGAGAGCGAGGGATCTGTTCTACGCCC 226678 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTT 364008 ||||| || |||| | || |||||||| || || |||| || ||||||| ||| | Sbjct 226679 TTTGGATTCCTGATCTGTTCATGAAGCGAGTTGA-GCAGAACGGAGATTGGTCGCTCATG 226737 Query 364009 TGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATAC 364068 || || ||||| | || || || || || ||||| || || | || ||||| || Sbjct 226738 TGTCCCCACGAGAGCCCTGGCCTCAGTGACGTCTGGGGCGAAGAGTTTGAAGCTCTTTAT 226797 Query 364069 GAAAAGTA 364076 || ||||| Sbjct 226798 GAGAAGTA 226805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303006206167946