Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq18747 125 6e-24 seq9036 122 7e-23 >seq18747 Length=106157 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || Sbjct 22519 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCA 22578 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | |||||| ||||| ||||| |||||||| || || ||||| Sbjct 22579 GACACCATTGAGAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCCCCAGATCAG 22638 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | | || || || ||| Sbjct 22639 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGAGTGACTACAAC 22698 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || ||||| || || |||| || ||| | | ||||||||||| Sbjct 22699 ATCCAGAAAGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 22745 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || | Sbjct 23887 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 23946 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||| ||||| |||||||| || || ||||| Sbjct 23947 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 24006 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | | || || || ||| Sbjct 24007 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGAGTGACTACAAC 24066 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || ||||| || || |||| || ||| | | ||||||||||| Sbjct 24067 ATCCAGAAAGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 24113 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || Sbjct 22975 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCG 23034 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||| ||||| |||||||| || || ||||| Sbjct 23035 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 23094 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | | ||||| || ||| Sbjct 23095 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGAGCGACTACAAC 23154 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || |||| || ||| | | ||||||||||| Sbjct 23155 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 23201 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || Sbjct 22747 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCA 22806 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||| ||||| |||||||| || || ||||| Sbjct 22807 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 22866 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | ||||||||||| ||||||| | | | | ||||| || ||| Sbjct 22867 CAAAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAAC 22926 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || ||||| || || |||| || ||| | | ||||||||||| Sbjct 22927 ATCCAGAAAGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 22973 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || Sbjct 23203 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCA 23262 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| ||||| |||||||| || || ||||| Sbjct 23263 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 23322 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | ||||| || ||| Sbjct 23323 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAAC 23382 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || |||| || ||| | | |||||||||| Sbjct 23383 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGTCTGAGAGGAGG 23429 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || Sbjct 23431 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCA 23490 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||| ||||| |||||||| || || ||||| Sbjct 23491 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 23550 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | || || || ||| Sbjct 23551 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGTGACTACAAC 23610 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || |||| || ||| | | ||||||||||| Sbjct 23611 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 23657 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || Sbjct 23659 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCG 23718 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||| ||||| |||||||| || || ||||| Sbjct 23719 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 23778 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | || || || ||| Sbjct 23779 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGTGACTACAAC 23838 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || |||| || ||| | | ||||||||||| Sbjct 23839 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 23885 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || | Sbjct 24115 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 24174 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||| ||||| |||||||| || || ||||| Sbjct 24175 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 24234 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | || || || ||| Sbjct 24235 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGTGACTACAAC 24294 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || |||| || ||| | | |||||||| || Sbjct 24295 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGTTTGAGAGGCGG 24341 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || | || || || | || ||| | || || ||| || Sbjct 22290 AATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTGGAGCCCTC 22349 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| ||| | || || ||||| ||||| |||||||| || || ||||| Sbjct 22350 AGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCA 22409 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||| |||| | | |||||||||||| ||||||| | | | | ||||| || || Sbjct 22410 GCAGAGATTGATCTTTGCCGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAA 22469 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| || || || || || |||| || ||| | | |||||||||| Sbjct 22470 CATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGTCTGAGAGGAGG 22517 >seq9036 Length=11236 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || | Sbjct 10753 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 10694 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||| ||||| |||||||| || || ||||| Sbjct 10693 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 10634 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | ||||| || ||| Sbjct 10633 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAAC 10574 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || |||| || ||| | | ||||||||||| Sbjct 10573 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGTTTGAGAGGAGG 10527 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || | Sbjct 10981 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 10922 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||| ||||| |||||||| || || ||||| Sbjct 10921 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 10862 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | ||||| || ||| Sbjct 10861 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAAC 10802 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || |||| || ||| | | ||||||||||| Sbjct 10801 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 10755 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| | || || ||| || | Sbjct 11209 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 11150 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||| ||||| |||||||| || || ||||| Sbjct 11149 GACACCATTGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 11090 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||||||||||| ||||||| | | | | ||||| || ||| Sbjct 11089 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAAC 11030 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || |||| || ||| | | ||||||||||| Sbjct 11029 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 10983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429826995504465