Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq3353 170 5e-38 >seq3353 Length=2286 Score = 170 bits (188), Expect = 5e-38 Identities = 209/283 (74%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 20431 GAGGACGGACGCATTCAACCCGGCTCCGTGCTAATCGTCGAAGGACTTGACCGCCTGAGC 20490 ||||||||||| | | | || || ||||| ||||| || || || |||||||| Sbjct 7 GAGGACGGACGTGTACCGCATGGATCTGTGCTGATCGTGGAGGGGCTGGACCGCCTCTCT 66 Query 20491 CGTGCAGAGCCAATTCAGGCTCAGGCACAGCTTGCGCAGATCATCAACGCCGGCATCACA 20550 || || || || || ||||| ||||| || || || ||||| | || || |||||||| Sbjct 67 CGCGCCGAACCCATCCAGGCCCAGGCGCAACTGGCCCAGATTGTAAATGCGGGCATCACC 126 Query 20551 GTTGTAACAGCAAGCGATGGTCGCGAGTACAACCGTGAGCGACTGAAAGCACAGCCGATG 20610 || || ||||| ||||| || | |||| ||| || || |||| | | || ||| Sbjct 127 GTGGTCACAGCGAGCGACGGAAAGGCCTACAGCCGCACCCGGCTCAAAGAAAACCCCATG 186 Query 20611 GATCTCGTGTACAGCCTACTCGTAATGATCCGGGCGCATGAAGAATCAGACACGAAAAGC 20670 ||||| || |||||||| || || |||||||| |||||||||||| |||||||| || Sbjct 187 GATCTGGTCTACAGCCTGCTGGTGATGATCCGCGCGCATGAAGAAAGCGACACGAAGAGT 246 Query 20671 AAGCGCGTGAAAG-CAGCAATTCGGCGGCAATGCGAGGGGTGG 20712 ||||| ||||||| |||| ||| |||| | |||||||| ||| Sbjct 247 AAGCGGGTGAAAGCCAGC-ATTAGGCGCCTGTGCGAGGGATGG 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143382170743548