Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq9036 125 7e-24 seq13439 123 2e-23 seq18747 120 3e-22 seq19936 111 1e-19 >seq9036 Length=11236 Score = 125 bits (138), Expect = 7e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | |||||||||||| || || | ||| |||||||| || |||||||| ||||| Sbjct 10526 GCCTCCTCTCAAACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 10585 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || || |||||||| || |||| || | |||||| || || || Sbjct 10586 CAGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGG 10645 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || || | | ||| | || |||| || ||| | Sbjct 10646 AATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAAC 10705 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||||| ||| || || || || || || || || ||||||||| || Sbjct 10706 CTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 10757 >seq13439 Length=213493 Score = 123 bits (136), Expect = 2e-23 Identities = 168/233 (72%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| ||| || | || ||||||||| || || | ||| |||||||| ||||||||||| Sbjct 37621 ATGATGCCTCCTCTCAGACGCAGCACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAG 37562 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 || |||| |||||| ||||| ||||||||||| || |||| || | |||||| || Sbjct 37561 TCACTCAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCT 37502 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| || || ||||| ||| || ||||| | || | ||||| | | | Sbjct 37501 GGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATCGTATCAGATGGC 37442 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| | ||| || || || || || || || || |||||||| Sbjct 37441 TCCACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 37389 >seq18747 Length=106157 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | |||||||||||| || || | ||| |||||||| || |||||||| || ||| Sbjct 24341 CCGCCTCTCAAACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTC 24282 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || || |||||||| || |||| || | |||||| || || || Sbjct 24281 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 24222 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || || | | ||| | || |||| || ||| | Sbjct 24221 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACC 24162 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||||| ||| || || || || || || || || ||||||||| || Sbjct 24161 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 24111 >seq19936 Length=449466 Score = 111 bits (122), Expect = 1e-19 Identities = 93/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 |||||||| | ||| | |||||||||||| || |||||||| ||||||| |||||| Sbjct 233824 CGCAGCACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 233883 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCT 131133 ||||| ||||||||||| || |||| || | |||||| || |||||||||||| Sbjct 233884 TCCTCAAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCGGGAGGGATTCCT 233937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471890058971520