Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq330 131 1e-25 seq20435 118 7e-22 seq9466 118 7e-22 seq474 118 7e-22 seq18661 107 1e-18 seq16161 107 1e-18 seq14302 107 1e-18 seq10106 107 1e-18 seq9928 107 1e-18 seq7688 107 1e-18 seq7503 107 1e-18 seq2866 107 1e-18 seq3888 100 2e-16 seq9693 96.9 2e-15 seq18747 89.7 3e-13 seq19976 87.8 1e-12 seq14749 87.8 1e-12 seq9036 82.4 5e-11 >seq330 Length=3908 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 2954 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 3013 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3014 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3048 >seq20435 Length=3120 Score = 118 bits (130), Expect = 7e-22 Identities = 82/93 (88%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||| ||| || ||||||||| Sbjct 2730 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATGGGGACAGTGGGAATCTCGTTG 2671 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||||||||||||||||||| |||||||| Sbjct 2670 ATCCATTCATGCGCGTCACTAATTGGATGACGA 2638 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 419 CTCTCTCTTCAAAGTTCTTTTCAACGTTCCCTCACGGTACTTGTTCGCTATCGGACTTGC 360 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 359 CATGGTATTTAGCCTTA 343 >seq9466 Length=1347 Score = 118 bits (130), Expect = 7e-22 Identities = 82/93 (88%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||| ||| || ||||||||| Sbjct 1182 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATGGGGACAGTGGGAATCTCGTTG 1241 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||||||||||||||||||| |||||||| Sbjct 1242 ATCCATTCATGCGCGTCACTAATTGGATGACGA 1274 >seq474 Length=3851 Score = 118 bits (130), Expect = 7e-22 Identities = 82/93 (88%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||| ||| || ||||||||| Sbjct 2825 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATGGGGACAGTGGGAATCTCGTTG 2766 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| ||||||||||||||||||| |||||||| Sbjct 2765 ATCCATTCATGCGCGTCACTAATTGGATGACGA 2733 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 858 CTCTCTCTTCAAAGTTCTTTTCAACGTTCCCTCACGGTACTTGTTCGCTATCGGACTTGC 799 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 798 CATGGTATTTAGCCTTA 782 >seq18661 Length=6716 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 327 CTCTCTCTTCAAAGTTCTTTTCAACGTTCCCTCACGGTACTTGTTCGCTATCGGACTTGC 268 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 267 CATGGTATTTAGCCTTA 251 >seq16161 Length=1021 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 356 CTCTCTCTTCAAAGTTCTTTTCAACGTTCCCTCACGGTACTTGTTCGCTATCGGACTTGC 415 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 416 CATGGTATTTAGCCTTA 432 >seq14302 Length=1094 Score = 107 bits (118), Expect = 1e-18 Identities = 74/84 (88%), Gaps = 5/84 (6%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||| ||| || ||||||||| Sbjct 86 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATGGGGACAGTGGGAATCTCGTTG 27 Query 25959 ATCCTTTCATGCGCGTCACTAATT 25982 |||| ||||||||||||||||||| Sbjct 26 ATCCATTCATGCGCGTCACTAATT 3 >seq10106 Length=1300 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 931 CTCTCTCTTCAAAGTTCTTTTCAACGTTCCCTCACGGTACTTGTTCGCTATCGGACTTGC 872 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 871 CATGGTATTTAGCCTTA 855 >seq9928 Length=1311 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 1127 CTCTCTCTTCAAAGTTCTTTTCAACGTTCCCTCACGGTACTTGTTCGCTATCGGACTTGC 1186 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1187 CATGGTATTTAGCCTTA 1203 >seq7688 Length=1484 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 1270 CTCTCTCTTCAAAGTTCTTTTCAACGTTCCCTCACGGTACTTGTTCGCTATCGGACTTGC 1329 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1330 CATGGTATTTAGCCTTA 1346 >seq7503 Length=1501 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 840 CTCTCTCTTCAAAGTTCTTTTCAACGTTCCCTCACGGTACTTGTTCGCTATCGGACTTGC 781 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 780 CATGGTATTTAGCCTTA 764 >seq2866 Length=1343 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 1123 CTCTCTCTTCAAAGTTCTTTTCAACGTTCCCTCACGGTACTTGTTCGCTATCGGACTTGC 1064 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1063 CATGGTATTTAGCCTTA 1047 >seq3888 Length=367485 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||| |||||||||||| ||||| ||| |||||| || || ||||| || | Sbjct 211489 CCACCTCTCAGACGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 211430 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | ||| ||||| ||||| || | | || ||||| | |||| Sbjct 211429 AGGGTGCGACCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGG 211370 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| || || ||||||||||| | || ||| || || Sbjct 211369 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACC 211310 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | || || || || || || | ||| ||||| || ||||||||| Sbjct 211309 TCAAGGGTGATGGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCATG 211262 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||| |||||||||||| ||||| ||| |||||| || || ||||| || | Sbjct 211717 CCACCTCTCAGACGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 211658 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | ||| ||||| ||||| || | | || ||||| | |||| Sbjct 211657 AGGGTGCGACCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGG 211598 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| || || ||||||||||| | || ||| || || Sbjct 211597 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACC 211538 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | || || || || || || | ||| ||||| || ||||||||| Sbjct 211537 TCAAGGGTGATGGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCATG 211490 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || ||||||| |||||||||||| ||||| ||| |||||| || || ||||| || | Sbjct 211945 CCCCCTCTCAGACGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 211886 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | ||| ||||| ||||| || | | || ||||| | |||| Sbjct 211885 AGGGTGCGACCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGG 211826 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| || || ||||||||||| | || ||| || || Sbjct 211825 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCTATGGTGTCTGAGGGCTCCACC 211766 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | || || || || || || | ||| ||||| || ||||||||| Sbjct 211765 TCAAGGGTGATGGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCATG 211718 >seq9693 Length=1329 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1008 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 1067 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 1068 GCCCGTATTTAGCCTT 1083 >seq18747 Length=106157 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || ||||||| ||||| |||||| ||||| ||| |||||| || || ||||| || | Sbjct 22517 CCTCCTCTCAGACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 22458 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | ||| || |||||||| || | | || ||||| | ||| Sbjct 22457 AGGGTGCGACCATCTTCCAGTTGCTTGCCGGCAAAGATCAATCTCTGCTGATCTGGGGGA 22398 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| || || ||||||||||| | || ||| || || Sbjct 22397 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACC 22338 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || || | ||| |||||||| |||||||| Sbjct 22337 TCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 22291 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || ||||||||||||| |||||| ||||| ||| |||||| || || ||||| ||| | Sbjct 24341 CCGCCTCTCAAACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTC 24282 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | ||| || || ||||| || | | || ||||| | ||| Sbjct 24281 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 24222 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| || || |||||||||| | || || ||||| Sbjct 24221 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACC 24162 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||| || || || || | ||| || || || ||||||||| Sbjct 24161 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 24114 >seq19976 Length=4793 Score = 87.8 bits (96), Expect = 1e-12 Identities = 76/94 (81%), Gaps = 8/94 (9%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCT---AGATAGTAGATAGGG-----GGTAATCTCG 25955 |||||||||| |||||||||||| | ||||||||||| ||| || ||||||| Sbjct 1326 GCCCGTTCCCCTGGCTGTGGTTTTTTTTGTAGATAGTAGATGGGGACAGTGGGAATCTCG 1267 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 || |||| |||||||||||||| |||| |||||| Sbjct 1266 TTGATCCATTCATGCGCGTCACCAATTGGATGAC 1233 >seq14749 Length=6867 Score = 87.8 bits (96), Expect = 1e-12 Identities = 76/94 (81%), Gaps = 8/94 (9%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCT---AGATAGTAGATAGGG-----GGTAATCTCG 25955 ||||||| || |||||||||||| | ||||||||||| ||| || ||||||| Sbjct 6375 GCCCGTTTCCCTGGCTGTGGTTTTTTTTGTAGATAGTAGATGGGGACAGTGGGAATCTCG 6316 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 || |||| ||||||||||||||||||| |||||| Sbjct 6315 TTGATCCATTCATGCGCGTCACTAATTGGATGAC 6282 >seq9036 Length=11236 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || ||||||||||||| |||||| ||||| ||| |||||| || || ||||| || | Sbjct 10527 CCTCCTCTCAAACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 10586 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | ||| || || ||||| || | | || ||||| | ||| Sbjct 10587 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 10646 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| || || |||||||||| | || || ||||| Sbjct 10647 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACC 10706 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||| || || || || | ||| || || || ||||||||| Sbjct 10707 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 10754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334862278638293