Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_008193.1 Length=30505 Score E Sequences producing significant alignments: (Bits) Value seq14018 91.5 3e-14 >seq14018 Length=1105 Score = 91.5 bits (100), Expect = 3e-14 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 1256 TTCTAAATGCGATGGCGCGAAATGTGCATACTTCATTGTCATTTCAATTGTTGAGTGTCC 1315 || ||||||| || | || | ||| ||| |||| ||||| |||| || || || Sbjct 182 TTTTAAATGCTCAGGATCAAACTTTGCGTACCTCATGGTCATGGCAATATCAGAATGACC 123 Query 1316 GAGAATCTCTTTTAATACTAAAATGTTTCCCCCGTTCATCATAAAATGACTGGCGAAAGT 1375 ||| || | || | ||| | |||||| || || ||||||||||| || ||||| || || Sbjct 122 GAGTATTTTTTGCAGTACCAGAATGTTGCCGCCATTCATCATAAAGTGGCTGGCAAAGGT 63 Query 1376 ATGGCGTAAAACGTGCGTAAGCTGTCCTTTCGGCAAATCAATACC 1420 ||| ||||| ||||| | ||||||||| || |||| ||||| Sbjct 62 ATGCCGTAATACGTGGCTTGCCTGTCCTTTGGGTAAATGGATACC 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97470315409962