Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2620 131 2e-25 >seq2620 Length=811290 Score = 131 bits (144), Expect = 2e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 ||| ||||||||||| || || |||||| || || |||||||||| | ||| || Sbjct 744361 TACAAGATTTTCATTAACAATTCCATCGCTGGCAGCGAAAAAAGCCAGAACATGAGAAAT 744420 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGAC 93594 || || ||| || ||| |||| ||||| | || | |||||||| || ||||| Sbjct 744421 GAAGTGACGCTCGTCTGGTTTCAGCTGCTCCCAGTGAGAAACGTCTTTTGAGAGGTCGAC 744480 Query 93595 TTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATA 93654 || || | ||||| || || ||||| |||||||||||||| | ||| ||||| || || Sbjct 744481 CTCCTCTGCCGTCCAGAAAGACGCTTCAGCTTTTTTGTACATTTGCCAGATGTCATGGTA 744540 Query 93655 TTGAATTGGAAATATGACAAAACGATTAGGGTTATCT 93691 ||| ||||| || ||||| || ||| ||||||||| Sbjct 744541 TTGTATTGGGAAAATGACGAATCGACGGGGGTTATCT 744577 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||||||||| |||| ||| |||||||| || |||| |||||| || ||||| ||| Sbjct 744188 ATGTATGTATCAATTAGCAGGCTGTACATTTCTGAGTGGATATTCTCAATCGCAATCTGG 744247 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTT 93461 ||||| ||||| ||||| ||||| |||| || ||||||| Sbjct 744248 AATCCATAGAAGCATCTCGCTTCTGTGACTTGAACTTCTT 744287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556715995309720