Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq13439 102 7e-17 seq18747 95.1 1e-14 >seq13439 Length=213493 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || |||| ||||| ||||| | Sbjct 37387 AGATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGCCAT 37446 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | ||||| | || || |||| || || |||||||||||||| || || || |||| Sbjct 37447 CTGATACGATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGATC 37506 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | | || ||||| ||||| ||| | |||||| |||||| | || |||| Sbjct 37507 AGCAGAGATTGATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTGAGTGACTACA 37566 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||||| || || || ||| | || || || |||| || | ||||| Sbjct 37567 ACATTCAGAAGGAGTCAACCCTTCACTTGGTGCTGCGTCTGAGAGGAGG 37615 >seq18747 Length=106157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| ||||| ||||| || | Sbjct 22291 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTGGAGCCCTCA 22350 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || || |||||||| || ||||| || ||||| Sbjct 22351 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 22410 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| || | || ||| |||||| | ||| |||||| Sbjct 22411 CAGAGATTGATCTTTGCCGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAAC 22470 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | || || || |||| || | ||||| Sbjct 22471 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGTCTGAGAGGAGG 22517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419621583605695