Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2620 96.9 7e-15 >seq2620 Length=811290 Score = 96.9 bits (106), Expect = 7e-15 Identities = 160/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669 ||||||| ||||| |||||||||||||| | ||| |||| || || ||||| | | Sbjct 744098 TGTTCAACGCCATCGAGACGATGCCCTGTGTTAAGGAGAAAGCTGATTGGGCATTGCGTT 744039 Query 42670 GGATCGA-GAGTCCCGACGCAACGTTCGGC-GAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||| | || || | ||| ||| || ||| | |||| || ||| | || || || Sbjct 744038 GGATCAATGATTCTCAGAGCA--GTTACGCTGAGCGTGTGGTCGCATTTGCTGCTGTGGA 743981 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGA 42786 ||| || || ||||| || | || || ||||||||||| | ||| || || || || Sbjct 743980 GGGTATTTTTTTCTCTGGGTCTTTTGCAGCCATCTTCTGGTTGAAGAAGCGTGGCGT-GA 743922 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 |||| || ||||| ||| ||||| | |||||||| || |||| Sbjct 743921 TGCCTGGTCTCACGTTCAGTAACGAGTTGATCAGCAGAGATGAGG 743877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944093636395280