Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq16867 105 1e-18 seq14711 105 1e-18 >seq16867 Length=7440 Score = 105 bits (116), Expect = 1e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 14179 CGGAACACCTCCGCCTGGGCGCGGGTGGCGGACAGGAAAATCTGGTTGCCACCCGTCAGA 14238 |||||||||||||||||||| | || |||||| | ||||||||||| | || ||| | Sbjct 1325 CGGAACACCTCCGCCTGGGCTCTGGAGGCGGAGATAAAAATCTGGTTCTCTCCGGTCTGC 1266 Query 14239 ATGGCATCCTCCAACGCCTCGCCGGCGAAATAGTAAGTCATCCCGATCTGACGGGACTTG 14298 | ||||||| |||||||||| | | ||||||| || | ||||||||| ||||| || Sbjct 1265 AGGGCATCCACCAACGCCTCCGCCGAGAAATAGCGGGTGAACCCGATCTGGCGGGATTTC 1206 Query 14299 AGAATGTTACG 14309 || | ||| || Sbjct 1205 AGCAGGTTCCG 1195 >seq14711 Length=7958 Score = 105 bits (116), Expect = 1e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 14179 CGGAACACCTCCGCCTGGGCGCGGGTGGCGGACAGGAAAATCTGGTTGCCACCCGTCAGA 14238 |||||||||||||||||||| | || |||||| | ||||||||||| | || ||| | Sbjct 1013 CGGAACACCTCCGCCTGGGCTCTGGAGGCGGAGATAAAAATCTGGTTCTCTCCGGTCTGC 1072 Query 14239 ATGGCATCCTCCAACGCCTCGCCGGCGAAATAGTAAGTCATCCCGATCTGACGGGACTTG 14298 | ||||||| |||||||||| | | ||||||| || | ||||||||| ||||| || Sbjct 1073 AGGGCATCCACCAACGCCTCCGCCGAGAAATAGCGGGTGAACCCGATCTGGCGGGATTTC 1132 Query 14299 AGAATGTTACG 14309 || | ||| || Sbjct 1133 AGCAGGTTCCG 1143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108603564421242