Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq18753 116 2e-21 >seq18753 Length=6687 Score = 116 bits (128), Expect = 2e-21 Identities = 247/366 (67%), Gaps = 2/366 (1%) Strand=Plus/Plus Query 65970 GGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCAC 66029 ||||| || || || |||| |||||||| ||||| || || | || ||| ||| | Sbjct 6269 GGCCGTGTTGTAGAAATCTTTGGTCCTGAATCTTCCGGTAAAACCACATTGACCCTGAGC 6328 Query 66030 GCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCC-GCCTACATCGACGCCGAACATTC 66088 | | ||| | || || ||| | || ||||| |||| | || ||||| || | Sbjct 6329 GTTATTGCCCAGGCTCAAAAG-CAGGGCGCAACTTGTGCCTTTGTTGATGCCGAGCACGC 6387 Query 66089 TCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCA 66148 || || || ||| |||| ||| || || |||| || |||| ||| || Sbjct 6388 CCTTGATCCGCTGTATGCCGGCAAGCTGGGTGTTAATGTGGATGATCTTTATGTTTCCCA 6447 Query 66149 GCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGT 66208 ||| ||||| || |||||||| || || ||| || | || || ||||| | || Sbjct 6448 GCCCGACACGGGTGAGCAGGCGCTTGAAATCACCGATATGCTGGTGCGCTCTGGTGCTGT 6507 Query 66209 TTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGA 66268 | || ||||| ||||| ||||| |||||||| || ||| || ||||||| || Sbjct 6508 GGATGTGATTGTTGTTGACTCGGTGGCAGCCCTGGTACCCAAGGCTGAAATCGAAGGTGA 6567 Query 66269 CATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCT 66328 || || || || ||||| || ||||| || || |||||||||||||| |||| || || Sbjct 6568 TATGGGTGATTCCCACGTTGGTCTGCAGGCTCGTCTGATGTCTCAGGCTCTGCGTAAACT 6627 Query 66329 GACCGG 66334 |||||| Sbjct 6628 GACCGG 6633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242408924888276