Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq11361 80.6 7e-11 >seq11361 Length=1230 Score = 80.6 bits (88), Expect = 7e-11 Identities = 126/179 (70%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 8849 CCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGATCATCGCGC 8908 |||| || || || | || ||| ||||| ||||| |||| || ||| | || || | Sbjct 178 CCGAGATTTCCCGATCGCTGAAAGCTATTGCCAAGGAGTTCGAAGTACCGGTTATTGCAC 119 Query 8909 TGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATGTCCGATC 8968 |||| ||||| || || || ||| | | |||||||| || || || | || || | Sbjct 118 TGTCTCAGCTGAACCGTTCTCTTGAGCAGAGACCAAACAAACGTCCTGTAAACTCTGACC 59 Query 8969 TGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCGCGAT 9027 | || || || || || ||||||||||| || ||||| || | ||| ||||||| ||| Sbjct 58 TTCGTGAATCAGGCGCCATCGAGCAGGACGCTGACGTCATTATGTTT-TCTACCGGGAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127514091692988