Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq18747 109 1e-18 seq3888 102 2e-16 seq9036 91.5 3e-13 >seq18747 Length=106157 Score = 109 bits (120), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || |||||||| |||| ||||||||| || || | ||||| Sbjct 22503 CAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 22444 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| ||||| ||||| | | |||||| || || ||| ||||| || Sbjct 22443 TTCCAGTTGCTTGCCGGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 22384 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| || | |||||||| | || || || | ||||| || Sbjct 22383 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAGGGTGATTGT 22324 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || ||||| || || || Sbjct 22323 CTTGCCGGTGAGGGTCTTCACGAAGATCTG 22294 Score = 100 bits (110), Expect = 7e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || |||||||| |||| |||||||||| || || | ||||| Sbjct 23643 CAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCATC 23584 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || ||| ||||| || Sbjct 23583 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 23524 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| || | |||||||| | || || || | || || || Sbjct 23523 CTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGT 23464 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 23463 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 23434 Score = 95.1 bits (104), Expect = 3e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || |||||||| |||| ||||||||| || || | ||||| Sbjct 23415 CAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 23356 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || ||| ||||| || Sbjct 23355 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 23296 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| || || | |||||||| | || || || | || || || Sbjct 23295 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGT 23236 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 23235 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 23206 Score = 95.1 bits (104), Expect = 3e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || |||||||| |||| |||||||||| || || | ||||| Sbjct 23871 CAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCATC 23812 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || ||| ||||| || Sbjct 23811 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 23752 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| || | |||||| | | || || || | || || || Sbjct 23751 CTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAATGGT 23692 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 23691 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 23662 Score = 95.1 bits (104), Expect = 3e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || |||||||| |||| |||||||||| || || | ||||| Sbjct 24327 CAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCATC 24268 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || ||| ||||| || Sbjct 24267 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 24208 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| || | |||||| | | || || || | || || || Sbjct 24207 CTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGT 24148 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 24147 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 24118 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || |||||||| |||| ||||||||| || || | ||||| Sbjct 23187 CAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 23128 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || ||| ||||| || Sbjct 23127 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 23068 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| || | |||||| | | || || || | || || || Sbjct 23067 CTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAATGGT 23008 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 23007 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 22978 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || ||||| || |||| |||||||||| || || | ||||| Sbjct 24099 CAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTCAGGGTGCGGCCATC 24040 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || ||| ||||| || Sbjct 24039 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 23980 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| || | |||||| | | || || || | || || || Sbjct 23979 CTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGT 23920 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 23919 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 23890 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || ||||| || |||| |||||||||| || || | ||||| Sbjct 22731 CAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTCAGGGTGCGGCCATC 22672 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || || ||||| || Sbjct 22671 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTGTC 22612 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| || || || | |||||||| | || || || | || || || Sbjct 22611 CTGGATCTTAGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGT 22552 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 22551 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 22522 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || ||||| || |||| ||||||||| || || | ||||| Sbjct 22959 CAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 22900 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | ||||| || || ||| ||||| || Sbjct 22899 TTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCTTCCTTGTC 22840 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| || | |||||||| | || || || | || || || Sbjct 22839 CTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGT 22780 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 22779 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 22750 >seq3888 Length=367485 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || |||||||| |||| ||||||||| || || | ||||||||||| || Sbjct 211466 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAGTTG 211407 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 |||||| || ||||| | | |||||| || || || ||||| ||||| ||||| Sbjct 211406 CTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTT 211347 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 |||||| || | |||||||| | || || || | ||||| ||||| || || Sbjct 211346 GGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGT 211287 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || Sbjct 211286 TAGGGTCTTCACAAAGATCTG 211266 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || |||||||| |||| ||||||||| || || | ||||||||||| || Sbjct 211694 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAGTTG 211635 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 |||||| || ||||| | | |||||| || || || ||||| ||||| ||||| Sbjct 211634 CTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTT 211575 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 |||||| || | |||||||| | || || || | ||||| ||||| || || Sbjct 211574 GGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGT 211515 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || Sbjct 211514 TAGGGTCTTCACAAAGATCTG 211494 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || |||||||| |||| ||||||||| || || | ||||||||||| || Sbjct 211922 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAGTTG 211863 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 |||||| || ||||| | | |||||| || || || ||||| ||||| ||||| Sbjct 211862 CTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTT 211803 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 |||||| || | |||||||| | || || || | ||||| ||||| || || Sbjct 211802 GGCCTTCACATTCTCTATGGTGTCTGAGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGT 211743 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || Sbjct 211742 TAGGGTCTTCACAAAGATCTG 211722 >seq9036 Length=11236 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || |||||||| |||| ||||||||| || || | ||||| Sbjct 10541 CAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 10600 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || ||| ||||| || Sbjct 10601 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 10660 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| || | |||||| | | || || || | || || || Sbjct 10661 CTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGT 10720 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 10721 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 10750 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || |||||||| |||| ||||||||| || || | ||||| Sbjct 10769 CAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 10828 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || ||| ||||| || Sbjct 10829 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 10888 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| || | |||||| | | || || || | || || || Sbjct 10889 CTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGT 10948 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 10949 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 10978 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || |||||||| |||| ||||||||| || || | ||||| Sbjct 10997 CAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 11056 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| ||||| || || ||||| | | |||||| || || ||| ||||| || Sbjct 11057 TTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 11116 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||| || | |||||| | | || || || | || || || Sbjct 11117 CTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGT 11176 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || ||||| || || Sbjct 11177 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 11206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178607372078801